RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ANKRD20A8PQ5CZ79 823 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 MS4A13Q5J8X5 152 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 SFTPA1Q8IWL2 248 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 KATNAL2Q8IYT4 538 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 TXLNBQ8N3L3 684 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 CMASQ8NFW8 434 aaPredicted RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 WFDC5Q8TCV5 224 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 RSAD2Q8WXG1 361 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 IRGQQ8WZA9 623 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 PRKD2Q9BZL6 878 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 DMGDHQ9UI17 866 aaKnown RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 AGO1Q9UL18 857 aaKnown RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 MRPS23Q9Y3D9 190 aaKnown RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 DOCK4Q8N1I0 1966 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 POLR3GO15318 223 aaPredicted RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 MFSD11O43934 449 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 ERLIN1O75477 346 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 KCNA5P22460 613 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 GLDCP23378 1020 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 CTNNA2P26232 953 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 PCK1P35558 622 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 LRIT3Q3SXY7 679 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 FAM133BQ5BKY9 247 aaKnown RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 FBXL22Q6P050 247 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 WDR93Q6P2C0 686 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 CCDC149Q6ZUS6 474 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 STRADAQ7RTN6 431 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 HDXQ7Z353 690 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 ARID3BQ8IVW6 561 aaPredicted RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 ACTL9Q8TC94 416 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 USP13Q92995 863 aaPredicted RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 ASIC4Q96FT7 647 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 SLC39A13Q96H72 371 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZNF419Q96HQ0 510 aaPredicted RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 PRICKLE1Q96MT3 831 aaPredicted RBP9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 PWWP2AQ96N64 755 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 KLC2Q9H0B6 622 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 ARHGEF4Q9NR80 690 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 DNMT3LQ9UJW3 386 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 WNT6Q9Y6F9 365 aa9.84□□□□□ -0.83
HMGCLL1-206ENST00000428842 GON4LQ3T8J9 2241 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 KCNU1A8MYU2 1149 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 PGRMC1O00264 195 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 TTI1O43156 1089 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 PSTPIP1O43586 416 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 GREM1O60565 184 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 ENDOD1O94919 500 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 PTPN2P17706 415 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 ERCC2P18074 760 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 CCR1P32246 355 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 SNX16P57768 344 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 OTUD4Q01804 1114 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 SMARCB1Q12824 385 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 KLF1Q13351 362 aaPredicted RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 AUHQ13825 339 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 HADHQ16836 314 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 TFDP3Q5H9I0 405 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 FSCBQ5H9T9 825 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 NAT16Q8N8M0 369 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 ZSCAN18Q8TBC5 510 aaPredicted RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 FGF13Q92913 245 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 CARD9Q9H257 536 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 NSUN3Q9H649 340 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 NYNRINQ9P2P1 1898 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 A0A0D9SEW6 157 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 H3BQF6 201 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 EEF2KO00418 725 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 GLI1P08151 1106 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 TCP1P17987 556 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 MAN1A1P33908 653 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 TUBP50607 506 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 VSNL1P62760 191 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 OLIG2Q13516 323 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 GRM2Q14416 872 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 PRSS36Q5K4E3 855 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 SEL1L2Q5TEA6 688 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 FAXCQ5TGI0 409 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 MICALCLQ6ZW33 695 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 LGI2Q8N0V4 545 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 ELMOD1Q8N336 334 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 DEFB123Q8N688 67 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 SH3RF2Q8TEC5 729 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 MRPS31Q92665 395 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 TRMT2BQ96GJ1 504 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 CDX2Q99626 313 aaPredicted RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 KLF16Q9BXK1 252 aaPredicted RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 POMKQ9H5K3 350 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 PIH1D1Q9NWS0 290 aaKnown RBP9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 PSD3Q9NYI0 1048 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 CLIC5Q9NZA1 410 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 TLR6Q9Y2C9 796 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 SSX2IPQ9Y2D8 614 aa9.83□□□□□ -0.84
HMGCLL1-206ENST00000428842 KIF26AQ9ULI4 1882 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 MIF4GDA9UHW6 222 aaKnown RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 E9PAM4 449 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 KCNK1O00180 336 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 SART1O43290 800 aaKnown RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 DAPK3O43293 454 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 RAD51CO43502 376 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 KRT7P08729 469 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms