RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 HESX1Q9UBX0 185 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 STOML2Q9UJZ1 356 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 RAXQ9Y2V3 346 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 COQ4Q9Y3A0 265 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 LOC400499M0QZD8 3231 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 A0A1W2PQ27 194 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 A0A1W2PQ64 194 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 FAM47DPA6NHR8 397 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 H0Y8X5 98 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 STX10O60499 249 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 ZNF883P0CG24 379 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 VDRP11473 427 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 AFF3P51826 1226 aaKnown RBP17.22■□□□□ 0.35
VARS-216ENST00000428445 FAM133BQ5BKY9 247 aaKnown RBP17.22■□□□□ 0.35
VARS-216ENST00000428445 PIK3R6Q5UE93 754 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 NADSYN1Q6IA69 706 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 IL27RAQ6UWB1 636 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 MMS22LQ6ZRQ5 1243 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 WFIKKN2Q8TEU8 576 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 KCTD13Q8WZ19 329 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 ORAI3Q9BRQ5 295 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 BTBD1Q9H0C5 482 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 ABCC13Q9NSE7 274 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 SERGEFQ9UGK8 458 aa17.22■□□□□ 0.35
VARS-216ENST00000428445 TP53BP1Q12888 1972 aaPredicted RBP17.22■□□□□ 0.35
VARS-216ENST00000428445 DNTTP04053 509 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 DLDP09622 509 aaKnown RBP17.21■□□□□ 0.35
VARS-216ENST00000428445 BRD2P25440 801 aaKnown RBP17.21■□□□□ 0.35
VARS-216ENST00000428445 ISM2Q6H9L7 571 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 TMEM270Q6UE05 265 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 TMPRSS7Q7RTY8 843 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 AHI1Q8N157 1196 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 CFAP52Q8N1V2 620 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.21■□□□□ 0.35
VARS-216ENST00000428445 SLC35F5Q8WV83 523 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 MYO19Q96H55 970 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 LMLNQ96KR4 655 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 MIS12Q9H081 205 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 KIAA1522Q9P206 1035 aaPredicted RBP17.21■□□□□ 0.35
VARS-216ENST00000428445 INTS6Q9UL03 887 aaKnown RBP17.21■□□□□ 0.35
VARS-216ENST00000428445 PCDHB4Q9Y5E5 795 aa17.21■□□□□ 0.35
VARS-216ENST00000428445 FLRT2O43155 660 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 ACSL4O60488 711 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 IGHV4-34P06331 123 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 POLR2EP19388 210 aaKnown RBP17.2■□□□□ 0.34
VARS-216ENST00000428445 CTSOP43234 321 aaPredicted RBP17.2■□□□□ 0.34
VARS-216ENST00000428445 CLDN6P56747 220 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 RPS24P62847 133 aaKnown RBP17.2■□□□□ 0.34
VARS-216ENST00000428445 FSCBQ5H9T9 825 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 DHX40Q8IX18 779 aaKnown RBP17.2■□□□□ 0.34
VARS-216ENST00000428445 GANCQ8TET4 914 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 SLC35C1Q96A29 364 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 PRICKLE1Q96MT3 831 aaPredicted RBP17.2■□□□□ 0.34
VARS-216ENST00000428445 EBF2Q9HAK2 575 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 CNGB3Q9NQW8 809 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 APC2O95996 2303 aa17.2■□□□□ 0.34
VARS-216ENST00000428445 URB1O60287 2271 aaKnown RBP17.19■□□□□ 0.34
VARS-216ENST00000428445 ACACAQ13085 2346 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 TRABD2BA6NFA1 517 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 CBX4O00257 560 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 WNT9AO14904 365 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 SIN3BO75182 1162 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 DKK1O94907 266 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 IGLV3-27P01718 113 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 FYNP06241 537 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 ATP5BP06576 529 aaKnown RBP17.19■□□□□ 0.34
VARS-216ENST00000428445 CD27P26842 260 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 CSKP41240 450 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 TBX4P57082 545 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 CYP4F3Q08477 520 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 TEAD4Q15561 434 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 ZNF658Q5TYW1 1059 aaPredicted RBP17.19■□□□□ 0.34
VARS-216ENST00000428445 MSANTD2Q6P1R3 559 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 LCLAT1Q6UWP7 414 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 PDZD3Q86UT5 571 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 GATAD2AQ86YP4 633 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 CARNMT1Q8N4J0 409 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 ADAM32Q8TC27 787 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 SLC6A18Q96N87 628 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 CDC6Q99741 560 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 GTPBP4Q9BZE4 634 aaKnown RBP17.19■□□□□ 0.34
VARS-216ENST00000428445 NUCKS1Q9H1E3 243 aaKnown RBP17.19■□□□□ 0.34
VARS-216ENST00000428445 PCED1AQ9H1Q7 454 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 SUN2Q9UH99 717 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 XPO7Q9UIA9 1087 aaKnown RBP17.19■□□□□ 0.34
VARS-216ENST00000428445 PCDHGB2Q9Y5G2 931 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 FASNP49327 2511 aaKnown RBP17.19■□□□□ 0.34
VARS-216ENST00000428445 BPTFQ12830 3046 aa17.19■□□□□ 0.34
VARS-216ENST00000428445 A0A1W2PP55 124 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 M0QYV0 167 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 MID1O15344 667 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 LATS1O95835 1130 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 LTFP02788 710 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 WNT1P04628 370 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 SETSIPP0DME0 302 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 CTSKP43235 329 aa17.18■□□□□ 0.34
VARS-216ENST00000428445 FKBP3Q00688 224 aaKnown RBP17.18■□□□□ 0.34
VARS-216ENST00000428445 SUZ12Q15022 739 aaKnown RBP17.18■□□□□ 0.34
VARS-216ENST00000428445 SOWAHCQ53LP3 525 aaPredicted RBP17.18■□□□□ 0.34
VARS-216ENST00000428445 ZNF776Q68DI1 518 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms