RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TPM3P06753 285 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 DLDP09622 509 aaKnown RBP9.47□□□□□ -0.89
SMC1A-203ENST00000428014 IRF1P10914 325 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 ATP1A3P13637 1013 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 ABCB4P21439 1286 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 HTR7P34969 479 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 PBX1P40424 430 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 P2RY2P41231 377 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 PTPN9P43378 593 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 SFSWAPQ12872 951 aaKnown RBP9.47□□□□□ -0.89
SMC1A-203ENST00000428014 DCAF6Q58WW2 860 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 RABGAP1LQ5R372 815 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 SYPL2Q5VXT5 272 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 PKN3Q6P5Z2 889 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 SLC36A4Q6YBV0 504 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 ZNF783Q6ZMS7 281 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 FAM183BPQ6ZVS7 135 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 STRADAQ7RTN6 431 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 RABEPKQ7Z6M1 372 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 TAC4Q86UU9 113 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 XYLT1Q86Y38 959 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 DRC7Q8IY82 874 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 C3orf20Q8ND61 904 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 CLEC4CQ8WTT0 213 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 DDI1Q8WTU0 396 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 BAP1Q92560 729 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 LMLNQ96KR4 655 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 HAPLN3Q96S86 360 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 PRMT1Q99873 361 aaKnown RBP9.47□□□□□ -0.89
SMC1A-203ENST00000428014 PDCL3Q9H2J4 239 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 TMEM245Q9H330 911 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 ACP6Q9NPH0 428 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 TJP2Q9UDY2 1190 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 GMEB2Q9UKD1 530 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 NAALADL1Q9UQQ1 740 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 ITIH6Q6UXX5 1313 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
SMC1A-203ENST00000428014 ATG2BQ96BY7 2078 aa9.46□□□□□ -0.89
SMC1A-203ENST00000428014 SPTBN4Q9H254 2564 aa9.46□□□□□ -0.89
SMC1A-203ENST00000428014 A0A1W2PQF6 199 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 PRRT4C9JH25 899 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 SGK1O00141 431 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 HRO43593 1189 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 CLDN11O75508 207 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 EPN2O95208 641 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 SRPRAP08240 638 aaKnown RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 PABPC1P11940 636 aaKnown RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 HLA-FP30511 346 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 NSFP46459 744 aaKnown RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 ZNF135P52742 658 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 LIMK1P53667 647 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 APBA1Q02410 837 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 LMNB2Q03252 620 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 CAMK2GQ13555 558 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 SIM2Q14190 667 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 STARD3Q14849 445 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 ELF2Q15723 593 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 CSRP2Q16527 193 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 HSP90AA4PQ58FG1 418 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 PEAR1Q5VY43 1037 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 OR6B2Q6IFH4 312 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 TPGS1Q6ZTW0 290 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 SND1Q7KZF4 910 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 IRF2BP2Q7Z5L9 587 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 SETD3Q86TU7 594 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 DEFB106AQ8N104 65 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 TXNDC5Q8NBS9 432 aaKnown RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 FNIP1Q8TF40 1166 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 NDRG1Q92597 394 aaKnown RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 CENPIQ92674 756 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 NTAN1Q96AB6 310 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 SPACA7Q96KW9 195 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 PHOX2BQ99453 314 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 FAM86C1Q9NVL1 165 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 DDIT4Q9NX09 232 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 DONSONQ9NYP3 566 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 KIAA1522Q9P206 1035 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 PPARGC1AQ9UBK2 798 aaKnown RBP9.46□□□□□ -0.9
SMC1A-203ENST00000428014 HCN2Q9UL51 889 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 PLA2G4CQ9UP65 541 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 TBC1D30Q9Y2I9 924 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 R4GN57 208 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 DMDP11532 3685 aa9.46□□□□□ -0.9
SMC1A-203ENST00000428014 CACNA1EQ15878 2313 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 TCRBV5S1A1TA0A578 114 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 SYCE3A1L190 88 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 TARSL2A2RTX5 802 aaKnown RBP9.45□□□□□ -0.9
SMC1A-203ENST00000428014 SIGLEC16A6NMB1 481 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 DRGXA6NNA5 263 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 F5H5T6 163 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 GOLGA6L19H0YKK7 550 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 EPHB6O15197 1021 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 MSI1O43347 362 aaKnown RBP9.45□□□□□ -0.9
SMC1A-203ENST00000428014 LUC7L3O95232 432 aaKnown RBP9.45□□□□□ -0.9
SMC1A-203ENST00000428014 MOCS3O95396 460 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 KLF8O95600 359 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-203ENST00000428014 MMEP08473 750 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 HOXB2P14652 356 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 DESP17661 470 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 CHRNB2P17787 502 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms