RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SLC12A1Q13621 1099 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ALCAMQ13740 583 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRKG1Q13976 671 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 GALNT3Q14435 633 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 MESDQ14696 234 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ACAP2Q15057 778 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 NPY5RQ15761 445 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 BMT2Q1RMZ1 405 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PLEKHG4Q58EX7 1191 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 HYIQ5T013 277 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZFYVE27Q5T4F4 411 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 INTS11Q5TA45 600 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 FAXCQ5TGI0 409 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 LIN9Q5TKA1 542 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 BROXQ5VW32 411 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 NANOGP8Q6NSW7 305 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF790Q6PG37 636 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 FKBP9P1Q75LS8 142 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF767PQ75MW2 155 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ENOSF1Q7L5Y1 443 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CAND1Q86VP6 1230 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC26A11Q86WA9 606 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZNF677Q86XU0 584 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARID3BQ8IVW6 561 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CCDC60Q8IWA6 550 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ELMOD2Q8IZ81 293 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 DEFB107AQ8IZN7 70 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PGAM4Q8N0Y7 254 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 REXO1Q8N1G1 1221 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PARP8Q8N3A8 854 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZCCHC7Q8N3Z6 543 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CARNMT1Q8N4J0 409 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 POU5F2Q8N7G0 328 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 MFSD2AQ8NA29 543 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 SLC4A11Q8NBS3 891 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 LILRB1Q8NHL6 650 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 EXD1Q8NHP7 514 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 RP9Q8TA86 221 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 SEPT8Q92599 483 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 POP5Q969H6 163 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 VPS33AQ96AX1 596 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CCDC124Q96CT7 223 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARHGEF26Q96DR7 871 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CEP170P1Q96L14 293 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 C9orf72Q96LT7 481 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 WRNIP1Q96S55 665 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 C9orf16Q9BUW7 83 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 HOXD1Q9GZZ0 328 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 THAP2Q9H0W7 228 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZHX3Q9H4I2 956 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 EFCAB1Q9HAE3 211 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 LIN7BQ9HAP6 207 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 KCNK13Q9HB14 408 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 NEK6Q9HC98 313 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 LRRC4CQ9HCJ2 640 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PNPLA8Q9NP80 782 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 OSGEPQ9NPF4 335 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANLNQ9NQW6 1124 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARHGEF4Q9NR80 690 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 C20orf96Q9NUD7 363 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 SIRPGQ9P1W8 387 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ARPP21Q9UBL0 812 aaPredicted RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 SERPINB13Q9UIV8 391 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 RIMS3Q9UJD0 308 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 ANAPC2Q9UJX6 822 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PCDHA6Q9UN73 950 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 MRPL11Q9Y3B7 192 aaKnown RBP5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 PCDHA8Q9Y5H6 950 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 DOCK2Q92608 1830 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 CAMTA1Q9Y6Y1 1673 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 BCORQ6W2J9 1755 aa5.75□□□□□ -1.49
VTI1BP4-201ENST00000427516 MEGF6O75095 1541 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 NRXN3Q9Y4C0 1643 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRSS51A0A1B0GVH4 220 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TCRBV5S4A2TA0A5A2 114 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 GOLGA8IPA6NC78 632 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 TRIM64A6NGJ6 449 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 ZSCAN5BA6NJL1 495 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 GSG1L2A8MUP6 293 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRR5-ARHGAP8B1AHC4 643 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 POLR1CO15160 346 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 DFNA5O60443 496 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRDM1O75626 825 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 CPNE6O95741 557 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 PRLP01236 227 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 FTLP02792 175 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 NR3C1P04150 777 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 IFNA16P05015 189 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 S100A6P06703 90 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 RPS17P08708 135 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 KRT7P08729 469 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 FGRP09769 529 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 NAT2P11245 290 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 YBX3P16989 372 aaKnown RBP eCLIP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 JUNBP17275 347 aaPredicted RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 MX2P20592 715 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 BGNP21810 368 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 IVDP26440 423 aa5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 POLR2BP30876 1174 aaKnown RBP5.74□□□□□ -1.49
VTI1BP4-201ENST00000427516 MAPK4P31152 587 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms