RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 SEMA3BQ13214 749 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 RPS6KA1Q15418 735 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 CA9Q16790 459 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 C5orf22Q49AR2 442 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 MPPE1Q53F39 396 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 RABGAP1LQ5R372 815 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 TTC39BQ5VTQ0 682 aaPredicted RBP15.92■□□□□ 0.14
COL11A1-204ENST00000427239 FBXL22Q6P050 247 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 VSIG1Q86XK7 387 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 RCOR2Q8IZ40 523 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 PYROXD2Q8N2H3 581 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 RSAD2Q8WXG1 361 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 IRF7Q92985 503 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 GPATCH2LQ9NWQ4 482 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 STIM2Q9P246 746 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 RCOR3Q9P2K3 495 aaPredicted RBP15.92■□□□□ 0.14
COL11A1-204ENST00000427239 PPARGC1AQ9UBK2 798 aaKnown RBP15.92■□□□□ 0.14
COL11A1-204ENST00000427239 VANGL2Q9ULK5 521 aa15.92■□□□□ 0.14
COL11A1-204ENST00000427239 HELZP42694 1942 aaKnown RBP15.92■□□□□ 0.14
COL11A1-204ENST00000427239 IGLV3-10A0A075B6K4 115 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 TYW5A2RUC4 315 aaKnown RBP15.91■□□□□ 0.14
COL11A1-204ENST00000427239 C19orf67A6NJJ6 358 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 DRGXA6NNA5 263 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 E9PAM4 449 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 GFRA2O00451 464 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 TUBB4AP04350 444 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 KDELR1P24390 212 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 GDI1P31150 447 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 ARL4AP40617 200 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 ARSEP51690 589 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 CDH6P55285 790 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 GRM2Q14416 872 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 KRT81Q14533 505 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 PPP6R3Q5H9R7 873 aaPredicted RBP15.91■□□□□ 0.14
COL11A1-204ENST00000427239 RFWD3Q6PCD5 774 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 RHBDF2Q6PJF5 856 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 LGI2Q8N0V4 545 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 SLC35F6Q8N357 371 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 EXD1Q8NHP7 514 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 KRT35Q92764 455 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 RPRD1AQ96P16 312 aaPredicted RBP15.91■□□□□ 0.14
COL11A1-204ENST00000427239 MAGEB5Q9BZ81 275 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 BRD9Q9H8M2 597 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 TRPV5Q9NQA5 729 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 DONSONQ9NYP3 566 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 A0A0C4DFX4 3053 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 ZNF487B1APH4 448 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 FAM72CH0Y354 149 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 CREB3O43889 395 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 LRIG2O94898 1065 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 ADH1CP00326 375 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 CETN2P41208 172 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 COPS2P61201 443 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 ETF1P62495 437 aaKnown RBP15.91■□□□□ 0.14
COL11A1-204ENST00000427239 TDGQ13569 410 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 RUNX3Q13761 415 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 FAM72AQ5TYM5 149 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 MANEALQ5VSG8 457 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 FAM72DQ6L9T8 149 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 C14orf80Q86SX3 495 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 FAM72BQ86X60 149 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 TMEM25Q86YD3 366 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 ZNF683Q8IZ20 524 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 HJURPQ8NCD3 748 aaPredicted RBP15.91■□□□□ 0.14
COL11A1-204ENST00000427239 DDI1Q8WTU0 396 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 RBM41Q96IZ5 413 aaKnown RBP15.91■□□□□ 0.14
COL11A1-204ENST00000427239 ZFYVE19Q96K21 471 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 KCTD15Q96SI1 283 aaPredicted RBP15.91■□□□□ 0.14
COL11A1-204ENST00000427239 TLR10Q9BXR5 811 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 PCDH18Q9HCL0 1135 aa15.91■□□□□ 0.14
COL11A1-204ENST00000427239 PACSIN2Q9UNF0 486 aaPredicted RBP15.91■□□□□ 0.14
COL11A1-204ENST00000427239 LRRD1A4D1F6 860 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 H3BRJ5 948 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 EEF2KO00418 725 aaKnown RBP15.9■□□□□ 0.14
COL11A1-204ENST00000427239 DDX3YO15523 660 aaKnown RBP15.9■□□□□ 0.14
COL11A1-204ENST00000427239 DAPK3O43293 454 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 TSPAN3O60637 253 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 EPHB2P29323 1055 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 DHCR24Q15392 516 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 LY6G5CQ5SRR4 150 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 TRIM68Q6AZZ1 485 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 TPGS1Q6ZTW0 290 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 NYAP1Q6ZVC0 841 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 CPA6Q8N4T0 437 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 RAPGEF5Q92565 580 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 TBC1D31Q96DN5 1066 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 ASIC4Q96FT7 647 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 ZNF670Q9BS34 389 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 CALN1Q9BXU9 219 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 ZYG11BQ9C0D3 744 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 EBF3Q9H4W6 596 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 ECT2Q9H8V3 914 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 PRDM16Q9HAZ2 1276 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 RRAGDQ9NQL2 400 aaPredicted RBP15.9■□□□□ 0.14
COL11A1-204ENST00000427239 CWC15Q9P013 229 aaKnown RBP15.9■□□□□ 0.14
COL11A1-204ENST00000427239 MARK1Q9P0L2 795 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 SNX10Q9Y5X0 201 aa15.9■□□□□ 0.14
COL11A1-204ENST00000427239 ARNTLO00327 626 aa15.89■□□□□ 0.13
COL11A1-204ENST00000427239 TRDMT1O14717 391 aaKnown RBP15.89■□□□□ 0.13
COL11A1-204ENST00000427239 FGF10O15520 208 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms