RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CMTM5Q96DZ9 223 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 GCOM2Q9BZD3 368 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 KLHL4Q9C0H6 718 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 CXCL16Q9H2A7 254 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 ASB7Q9H672 318 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 PDGFCQ9NRA1 345 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 TMPRSS4Q9NRS4 437 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 CDH22Q9UJ99 828 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 SORCS3Q9UPU3 1222 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 RPS6KL1Q9Y6S9 549 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 MYO18AQ92614 2054 aaKnown RBP7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 NEMP1O14524 444 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 CFLARO15519 480 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 ADCY6O43306 1168 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 CREB3O43889 395 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 GABBR2O75899 941 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 VAV1P15498 845 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 ARL4AP40617 200 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 ABCE1P61221 599 aaKnown RBP7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 TBL3Q12788 808 aaKnown RBP7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 DLG1Q12959 904 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 GLRA4Q5JXX5 417 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 FRMD7Q6ZUT3 714 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 NLRP7Q8WX94 980 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 CENPKQ9BS16 269 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 FAM192AQ9GZU8 254 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SMARCAD1Q9H4L7 1026 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 PDZD7Q9H5P4 517 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SYBUQ9NX95 663 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 KIAA1257Q9ULG3 409 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 POMPQ9Y244 141 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 ZNF646O15015 1829 aaPredicted RBP7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 A0A0A0MRY4 1105 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 CCDC78A2IDD5 438 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 MDM4O15151 490 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 HBP1O60381 514 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 DGKIO75912 1065 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 MCF2P10911 925 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 ZFXP17010 805 aaPredicted RBP7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 VCLP18206 1134 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 CNTFP26441 200 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 PSMB4P28070 264 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SERPINB5P36952 375 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SEMA5AQ13591 1074 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SOWAHAQ2M3V2 549 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 LIN52Q52LA3 116 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 AAGABQ6PD74 315 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 PLPPR4Q7Z2D5 763 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 PID1Q7Z2X4 250 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SDCCAG8Q86SQ7 713 aaPredicted RBP7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SESTD1Q86VW0 696 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 PDSS2Q86YH6 399 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SPATA13Q96N96 652 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 GCNAQ96QF7 691 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SORT1Q99523 831 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 COPG2Q9UBF2 871 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 KCNK1O00180 336 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 RNF103O00237 685 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 CCDC130P13994 396 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 CD1EP15812 388 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 MX2P20592 715 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 ITGAXP20702 1163 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 EDNRBP24530 442 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 GRK2P25098 689 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 CDK18Q07002 472 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 DLG2Q15700 870 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 MTHFD1LQ6UB35 978 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 C4orf22Q6V702 233 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 TMEM110Q86TL2 294 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 RIOX2Q8IUF8 465 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 PLD6Q8N2A8 252 aaKnown RBP7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 ZNF781Q8N8C0 355 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 SLC35F5Q8WV83 523 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 P2RY11Q96G91 374 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 QKIQ96PU8 341 aaKnown RBP eCLIP7.73□□□□□ -1.173e-7■■■□□ 15.5
SMARCC1-202ENST00000425518 VPS33BQ9H267 617 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 DPEP3Q9H4B8 488 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 COG4Q9H9E3 785 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 CAB39LQ9H9S4 337 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 MTMR10Q9NXD2 777 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 DNAJB4Q9UDY4 337 aa7.73□□□□□ -1.17
SMARCC1-202ENST00000425518 ATP5BP06576 529 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 COX4I1P13073 169 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 NR2C2P49116 596 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 CDK7P50613 346 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 INCA1Q0VD86 236 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 IFRD2Q12894 506 aaPredicted RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 DPYSL2Q16555 572 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 DALRD3Q5D0E6 543 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 NCBP2-AS2Q69YL0 99 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 MARK2Q7KZI7 788 aaKnown RBP7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 DEFB132Q7Z7B7 95 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 TP53INP2Q8IXH6 220 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 DCLK2Q8N568 766 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 RNF148Q8N7C7 305 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 DNAAF3Q8N9W5 541 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ACMSDQ8TDX5 336 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 ZFAND2BQ8WV99 257 aa7.72□□□□□ -1.17
SMARCC1-202ENST00000425518 SPATA16Q9BXB7 569 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms