RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 CIPCQ9C0C6 399 aa15.37■□□□□ 0.05
LINC01840-201ENST00000421870 TMEM245Q9H330 911 aa15.37■□□□□ 0.05
LINC01840-201ENST00000421870 SYNCQ9H7C4 482 aa15.37■□□□□ 0.05
LINC01840-201ENST00000421870 ABCB8Q9NUT2 735 aa15.37■□□□□ 0.05
LINC01840-201ENST00000421870 CALCOCO1Q9P1Z2 691 aa15.37■□□□□ 0.05
LINC01840-201ENST00000421870 BCCIPQ9P287 314 aaKnown RBP eCLIP15.37■□□□□ 0.05
LINC01840-201ENST00000421870 SLC12A6Q9UHW9 1150 aa15.37■□□□□ 0.05
LINC01840-201ENST00000421870 MBD1Q9UIS9 605 aaPredicted RBP15.37■□□□□ 0.05
LINC01840-201ENST00000421870 GGA2Q9UJY4 613 aa15.37■□□□□ 0.05
LINC01840-201ENST00000421870 USP18Q9UMW8 372 aa15.37■□□□□ 0.05
LINC01840-201ENST00000421870 RAD54BQ9Y620 910 aa15.37■□□□□ 0.05
LINC01840-201ENST00000421870 SPTBN4Q9H254 2564 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 BCLAF3A2AJT9 711 aaKnown RBP15.36■□□□□ 0.05
LINC01840-201ENST00000421870 ZBTB24O43167 697 aaPredicted RBP15.36■□□□□ 0.05
LINC01840-201ENST00000421870 DAB1O75553 588 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 PABPC1P11940 636 aaKnown RBP15.36■□□□□ 0.05
LINC01840-201ENST00000421870 NDUFV2P19404 249 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 SDHBP21912 280 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 NOMO3P69849 1222 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 FMO1Q01740 532 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 PRR23CQ6ZRP0 262 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 CHST9Q7L1S5 443 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 ARCQ7LC44 396 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 CFAP52Q8N1V2 620 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 SLC20A1Q8WUM9 679 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 CPA5Q8WXQ8 436 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 SORCS1Q8WY21 1168 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 PGAP3Q96FM1 320 aaPredicted RBP15.36■□□□□ 0.05
LINC01840-201ENST00000421870 SPAG5Q96R06 1193 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 ADAM33Q9BZ11 813 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 RTN4Q9NQC3 1192 aaKnown RBP15.36■□□□□ 0.05
LINC01840-201ENST00000421870 TMEM51Q9NW97 253 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 DDIT4Q9NX09 232 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.36■□□□□ 0.05
LINC01840-201ENST00000421870 STIM2Q9P246 746 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 TMEM59LQ9UK28 342 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 PLA2G4CQ9UP65 541 aa15.36■□□□□ 0.05
LINC01840-201ENST00000421870 LAMA1P25391 3075 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 MUC22E2RYF6 1773 aaPredicted RBP15.35■□□□□ 0.05
LINC01840-201ENST00000421870 M0QYT0 321 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 ZNF217O75362 1048 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 MOCS2O96007 188 aaPredicted RBP15.35■□□□□ 0.05
LINC01840-201ENST00000421870 DLDP09622 509 aaKnown RBP15.35■□□□□ 0.05
LINC01840-201ENST00000421870 UNGP13051 313 aaPredicted RBP15.35■□□□□ 0.05
LINC01840-201ENST00000421870 ABCB4P21439 1286 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 TACR2P21452 398 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 MMP8P22894 467 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 CD70P32970 193 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 ZNF165P49910 485 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 IQCB1Q15051 598 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 PTPRNQ16849 979 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 FUT11Q495W5 492 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 FSCBQ5H9T9 825 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 RAP1GAP2Q684P5 730 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 MBLAC2Q68D91 279 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 MFN1Q8IWA4 741 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 TTC17Q96AE7 1141 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 SPACA7Q96KW9 195 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 PCMTD1Q96MG8 357 aaPredicted RBP15.35■□□□□ 0.05
LINC01840-201ENST00000421870 FAM204AQ9H8W3 233 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 ITM2CQ9NQX7 267 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 VPS45Q9NRW7 570 aa15.35■□□□□ 0.05
LINC01840-201ENST00000421870 INTS6Q9UL03 887 aaKnown RBP15.35■□□□□ 0.05
LINC01840-201ENST00000421870 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.35■□□□□ 0.05
LINC01840-201ENST00000421870 TYW5A2RUC4 315 aaKnown RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 TEX33O43247 280 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 MAP3K13O43283 966 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 LUC7L3O95232 432 aaKnown RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 F9P00740 461 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 ATP5BP06576 529 aaKnown RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 POLR2EP19388 210 aaKnown RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 PRKCHP24723 683 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 MPLP40238 635 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 CXCR3P49682 368 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 RNASE9P60153 205 aaKnown RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 ARID5AQ03989 594 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 LMAN2Q12907 356 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 CAMK2GQ13555 558 aaPredicted RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 PUM1Q14671 1186 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 STARD3Q14849 445 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 RSPO4Q2I0M5 234 aaPredicted RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 SLC25A52Q3SY17 297 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 C2CD6Q53TS8 623 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 OTUD1Q5VV17 481 aaPredicted RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 NAA35Q5VZE5 725 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 SLC36A4Q6YBV0 504 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 TRIM72Q6ZMU5 477 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 LPCAT2Q7L5N7 544 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 BNIPLQ7Z465 357 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 LGI2Q8N0V4 545 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 MSANTD4Q8NCY6 345 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 MKRN2Q9H000 416 aaKnown RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 PRDM16Q9HAZ2 1276 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 ARHGEF38Q9NXL2 777 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 KIAA1522Q9P206 1035 aaPredicted RBP15.34■□□□□ 0.05
LINC01840-201ENST00000421870 DNAH14Q0VDD8 3507 aa15.34■□□□□ 0.05
LINC01840-201ENST00000421870 SYNJ2BP-COX16A0A087WUM0 186 aa15.33■□□□□ 0.04
LINC01840-201ENST00000421870 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.33■□□□□ 0.04
LINC01840-201ENST00000421870 IGHV1OR15-9A0A0B4J2B8 117 aa15.33■□□□□ 0.04
LINC01840-201ENST00000421870 F5H5T6 163 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms