RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 GRAMD1AQ96CP6 724 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 PPCSQ9HAB8 311 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 OR12D3Q9UGF7 316 aa11.27□□□□□ -0.61
DDX56-203ENST00000421223 DFFAO00273 331 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 KRT38O76015 456 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 KRT16P08779 473 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 GRIK1P39086 918 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 BZW1Q7L1Q6 419 aaKnown RBP11.26□□□□□ -0.61
DDX56-203ENST00000421223 NLRP9Q7RTR0 991 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 APOPT1Q96IL0 206 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 PLAC1Q9HBJ0 212 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 TMLHEQ9NVH6 421 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 PRKAG3Q9UGI9 489 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 SFMBT1Q9UHJ3 866 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 STARD13Q9Y3M8 1113 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 RPS6KL1Q9Y6S9 549 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 SDR42E2A6NKP2 422 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 GABRDO14764 452 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 PPP1R12AO14974 1030 aaPredicted RBP11.26□□□□□ -0.61
DDX56-203ENST00000421223 MSI1O43347 362 aaKnown RBP11.26□□□□□ -0.61
DDX56-203ENST00000421223 JCHAINP01591 159 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 PCSK1P29120 753 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 SERPINB4P48594 390 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 TAF1BQ53T94 588 aaPredicted RBP11.26□□□□□ -0.61
DDX56-203ENST00000421223 PLEKHG4Q58EX7 1191 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 DHRS4Q9BTZ2 278 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 COLEC11Q9BWP8 271 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 SYBUQ9NX95 663 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 TTC3P53804 2025 aa11.26□□□□□ -0.61
DDX56-203ENST00000421223 SPAG6O75602 509 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 NQO1P15559 274 aaKnown RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 BNIP1Q12981 228 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 ARL13BQ3SXY8 428 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 LRRTM3Q86VH5 581 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 NUDCD3Q8IVD9 361 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 GPR152Q8TDT2 470 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 ALKBH8Q96BT7 664 aaKnown RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 RTP4Q96DX8 246 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 TRIM55Q9BYV6 548 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 SENP6Q9GZR1 1112 aaPredicted RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 XAB2Q9HCS7 855 aaKnown RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 FBXO6Q9NRD1 293 aaPredicted RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 HEY2Q9UBP5 337 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 ZFP69BQ9UJL9 534 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 PSAT1Q9Y617 370 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 TTC36A6NLP5 189 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 TM9SF1O15321 606 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 ZBTB24O43167 697 aaPredicted RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 DGKIO75912 1065 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 PRKAR2AP13861 404 aaKnown RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 FCGRTP55899 365 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 CHI3L2Q15782 390 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 OVOS1Q6IE37 1185 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 NPWQ8N729 165 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 GBP7Q8N8V2 638 aaPredicted RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 ANKLE1Q8NAG6 615 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 AZIN2Q96A70 460 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 SMARCD1Q96GM5 515 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 VPS11Q9H270 941 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 ABI2Q9NYB9 513 aaPredicted RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 ZFATQ9P243 1243 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 L3MBTL1Q9Y468 752 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 USP3Q9Y6I4 520 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 SCN4AP35499 1836 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 FAM237BA0A1B0GVD1 139 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 GSTA1P08263 222 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 ODC1P11926 461 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 ARFIP2P53365 341 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 WASHC5Q12768 1159 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 UPP1Q16831 310 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 PPM1JQ5JR12 505 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 SERINC5Q86VE9 423 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 ZNF354CQ86Y25 554 aa11.25□□□□□ -0.61
DDX56-203ENST00000421223 ZNF669Q96BR6 464 aaPredicted RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 TACO1Q9BSH4 297 aaKnown RBP11.25□□□□□ -0.61
DDX56-203ENST00000421223 CHUKO15111 745 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 NEBLO76041 1014 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 LRIG2O94898 1065 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 ERFP50548 548 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 PGGT1BP53609 377 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 GJA9P57773 515 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 SEMA5AQ13591 1074 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 RNF43Q68DV7 783 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 TAC4Q86UU9 113 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 ARID3BQ8IVW6 561 aaPredicted RBP11.24□□□□□ -0.61
DDX56-203ENST00000421223 MCUQ8NE86 351 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 OR10T2Q8NGX3 314 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 FRMD8Q9BZ67 464 aaPredicted RBP11.24□□□□□ -0.61
DDX56-203ENST00000421223 YY1AP1Q9H869 796 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 CDH9Q9ULB4 789 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 Q9Y3F1 56 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 PCDHA11Q9Y5I1 949 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 CYBAP13498 195 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 FDFT1P37268 417 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 OR1G1P47890 313 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 PGFP49763 221 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 CERCAMQ5T4B2 595 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 PDZD4Q76G19 769 aaPredicted RBP11.24□□□□□ -0.61
DDX56-203ENST00000421223 RASSF3Q86WH2 238 aa11.24□□□□□ -0.61
DDX56-203ENST00000421223 TMEM86AQ8N2M4 240 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms