RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 STC2O76061 302 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 LRIG2O94898 1065 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 SRGAP2BP0DMP2 458 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 GOT1P17174 413 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 HDCP19113 662 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 STIP1P31948 543 aaKnown RBP14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 SLC11A2P49281 568 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 TFF2Q03403 129 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 C2orf54Q08AI8 447 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 BYSLQ13895 437 aaKnown RBP14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 MS4A13Q5J8X5 152 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 FAM72AQ5TYM5 149 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 FAM72DQ6L9T8 149 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 WDR93Q6P2C0 686 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 CCDC137Q6PK04 289 aaKnown RBP14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 PDZD4Q76G19 769 aaPredicted RBP14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 FAM72BQ86X60 149 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 DDX42Q86XP3 938 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 RFX6Q8HWS3 928 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 LRRC49Q8IUZ0 686 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 HS6ST3Q8IZP7 471 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 ADAMTS19Q8TE59 1207 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 P3H4Q92791 437 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 CATSPERBQ9H7T0 1116 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 COX16Q9P0S2 106 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 STIM2Q9P246 746 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 RAB21Q9UL25 225 aa14.72□□□□□ -0.05
SHMT1P1-201ENST00000419974 HACD1B0YJ81 288 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 GFRA2O00451 464 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 ACSL4O60488 711 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 MCM3P25205 808 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 NRIP1P48552 1158 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 VCPP55072 806 aaKnown RBP14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 TPI1P60174 286 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 MMRN1Q13201 1228 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 AUHQ13825 339 aaKnown RBP14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 CTC1Q2NKJ3 1217 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 ARHGAP15Q53QZ3 475 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 PIK3R6Q5UE93 754 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 NCBP2-AS2Q69YL0 99 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 TTC27Q6P3X3 843 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 Q6ZNB5 142 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 HTR3DQ70Z44 454 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 MIB1Q86YT6 1006 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 VN1R2Q8NFZ6 395 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 SHKBP1Q8TBC3 707 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 CCHCR1Q8TD31 782 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 FATE1Q969F0 183 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 TBC1D31Q96DN5 1066 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 RTP4Q96DX8 246 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 OLFM3Q96PB7 478 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 KRT12Q99456 494 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 DDX50Q9BQ39 737 aaKnown RBP14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 CORO1BQ9BR76 489 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 SLC46A2Q9BY10 475 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 FAM129AQ9BZQ8 928 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 NACA2Q9H009 215 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 DDX47Q9H0S4 455 aaKnown RBP14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 ATXN3LQ9H3M9 355 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 R3HDM2Q9Y2K5 976 aaKnown RBP14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 NEU2Q9Y3R4 380 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 BRWD1Q9NSI6 2320 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 BDP1A6H8Y1 2624 aa14.71□□□□□ -0.05
SHMT1P1-201ENST00000419974 BCLAF3A2AJT9 711 aaKnown RBP14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 CFAP69A5D8W1 941 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 E9PAM4 449 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 RHOQP17081 205 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 ERCC2P18074 760 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 TNFRSF8P28908 595 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 SERPINB6P35237 376 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 CCR2P41597 374 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 PTGIRP43119 386 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 DR1Q01658 176 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 OTUD4Q01804 1114 aaKnown RBP14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 ERCC6LQ2NKX8 1250 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 ADGRF1Q5T601 910 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 TTC39BQ5VTQ0 682 aaPredicted RBP14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 AFMIDQ63HM1 303 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 KAZNQ674X7 775 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 TXNDC8Q6A555 127 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 C8orf74Q6P047 294 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 LRRC31Q6UY01 552 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 GPR149Q86SP6 731 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 NLRP14Q86W24 1093 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 ACTL9Q8TC94 416 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 UHRF1Q96T88 793 aaPredicted RBP14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 LRRC1Q9BTT6 524 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 MAGEB5Q9BZ81 275 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 UBE2ZQ9H832 354 aaPredicted RBP14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 ANKZF1Q9H8Y5 726 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 TMPRSS4Q9NRS4 437 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 DTLQ9NZJ0 730 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 AMACRQ9UHK6 382 aa14.7□□□□□ -0.06
SHMT1P1-201ENST00000419974 A0A1W2PRU2 124 aa14.69□□□□□ -0.06
SHMT1P1-201ENST00000419974 E2F8A0AVK6 867 aa14.69□□□□□ -0.06
SHMT1P1-201ENST00000419974 RAD51CO43502 376 aa14.69□□□□□ -0.06
SHMT1P1-201ENST00000419974 ECEL1O95672 775 aa14.69□□□□□ -0.06
SHMT1P1-201ENST00000419974 GLP2RO95838 553 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms