RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CYP3A4P08684 503 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 MMP13P45452 471 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 TRAPPC10P48553 1259 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 HSF1Q00613 529 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 STIM1Q13586 685 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 CBFBQ13951 182 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 RBMS2Q15434 407 aaKnown RBP5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 GALNTL6Q49A17 601 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 SLC9C1Q4G0N8 1177 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 JMJD6Q6NYC1 403 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 WDR93Q6P2C0 686 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 SHC4Q6S5L8 630 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 SLC39A5Q6ZMH5 540 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 DEF8Q6ZN54 512 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 RTL10Q7L3V2 364 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 SLC44A2Q8IWA5 706 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 NRACQ8N912 160 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 PRSS3P2Q8NHM4 247 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 C16orf52Q8NHV5 167 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 DENND1AQ8TEH3 1009 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 SCARB1Q8WTV0 552 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 SMG7Q92540 1137 aaKnown RBP5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 PMM1Q92871 262 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 PTPRHQ9HD43 1115 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 TUBA8Q9NY65 449 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 RCE1Q9Y256 329 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 AFG3L2Q9Y4W6 797 aa5.05□□□□□ -1.6
HMGB1P49-201ENST00000418882 TTBK1Q5TCY1 1321 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 A0A0G2JK05 382 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 AGAP5A6NIR3 686 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 LDHAP00338 332 aaKnown RBP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 WNT1P04628 370 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 ENO1P06733 434 aaKnown RBP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 ITGA2BP08514 1039 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 LMO1P25800 156 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 CPA2P48052 419 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 RPS13P62277 151 aaKnown RBP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 ID2Q02363 134 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 TLE3Q04726 772 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 BLMHQ13867 455 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 ANXA2RQ3ZCQ2 193 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 CCDC38Q502W7 563 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 FAM83BQ5T0W9 1011 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 TTC22Q5TAA0 569 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 ANO7Q6IWH7 933 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 UBE2Q1Q7Z7E8 422 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 MYLK4Q86YV6 388 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 NANOGP1Q8N7R0 232 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 HMGB4Q8WW32 186 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 ZFPM2Q8WW38 1151 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 RSC1A1Q92681 617 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 ARPC5LQ9BPX5 153 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 PIMREGQ9BSJ6 248 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 ABHD14AQ9BUJ0 271 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 SORBS1Q9BX66 1292 aaKnown RBP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 OSBPL5Q9H0X9 879 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 PRDM16Q9HAZ2 1276 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 HEY2Q9UBP5 337 aa5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 HERC5Q9UII4 1024 aaKnown RBP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P49-201ENST00000418882 EMSYQ7Z589 1322 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 ZNF521Q96K83 1311 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 LY6G6EA0A0G2JKS1 128 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 A0A1W2PPC1 479 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 IPO5O00410 1097 aaKnown RBP5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 AKR1A1P14550 325 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 GRK5P34947 590 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 CHKAP35790 457 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 AP2B1P63010 937 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 RBM6P78332 1123 aaKnown RBP5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 B4GALNT1Q00973 533 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 RNASELQ05823 741 aaKnown RBP5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 HNRNPA0Q13151 305 aaKnown RBP5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 KIAA1755Q5JYT7 1200 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 ASPHD1Q5U4P2 390 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 TANGO2Q6ICL3 276 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 ZNF793Q6ZN11 406 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 RRAGAQ7L523 313 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 MDGA2Q7Z553 956 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 ZNF548Q8NEK5 533 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 OR52N4Q8NGI2 321 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 OTUD7AQ8TE49 926 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 KAT2AQ92830 837 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 CUL5Q93034 780 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 ATP2A3Q93084 1043 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 MSI2Q96DH6 328 aaKnown RBP5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 ABHD16BQ9H3Z7 469 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 IL21RQ9HBE5 538 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 TMEM45AQ9NWC5 275 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 COPG1Q9Y678 874 aaKnown RBP5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 ZMYM2Q9UBW7 1377 aa5.03□□□□□ -1.6
HMGB1P49-201ENST00000418882 CYP3A7-CYP3A51PA0A087WV96 503 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 UGDHO60701 494 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 FGBP02675 491 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 ALDOAP04075 364 aaKnown RBP5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 FGF2P09038 288 aa5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 ALDOCP09972 364 aaKnown RBP5.02□□□□□ -1.61
HMGB1P49-201ENST00000418882 TNFRSF1BP20333 461 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms