RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 RALGAPA1Q6GYQ0 2036 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 KCNU1A8MYU2 1149 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 AP5Z1O43299 807 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 DAB1O75553 588 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 LSM8O95777 96 aaKnown RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 ATP5BP06576 529 aaKnown RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 POLR2EP19388 210 aaKnown RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 ABCB4P21439 1286 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 TACR2P21452 398 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 CCR1P32246 355 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 NOS2P35228 1153 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 DPP6P42658 865 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 PTGER3P43115 390 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 GABRB2P47870 512 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 KLK7P49862 253 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 POLR2FP61218 127 aaKnown RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 RPL6Q02878 288 aaKnown RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 MTA1Q13330 715 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 TAF3Q5VWG9 929 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 RAP1GAP2Q684P5 730 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 KIAA1324Q6UXG2 1013 aaKnown RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 NOP9Q86U38 636 aaKnown RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 CHSY1Q86X52 802 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 ERICH1Q86X53 443 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 CCDC117Q8IWD4 279 aaPredicted RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 LGI2Q8N0V4 545 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 CFAP52Q8N1V2 620 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 PIGKQ92643 395 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 RNF34Q969K3 372 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 C18orf8Q96DM3 657 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 LMLNQ96KR4 655 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 MKRN2Q9H000 416 aaKnown RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 RXFP3Q9NSD7 469 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 FAM207AQ9NSI2 230 aaPredicted RBP17.06■□□□□ 0.32
LINC00404-201ENST00000418660 TMEM63CQ9P1W3 806 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 CYP8B1Q9UNU6 501 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 SIK3Q9Y2K2 1263 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 PLXND1Q9Y4D7 1925 aa17.06■□□□□ 0.32
LINC00404-201ENST00000418660 CEP250Q9BV73 2442 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 SYNJ2BP-COX16A0A087WUM0 186 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 LRRC10BA6NIK2 292 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 KHNYNO15037 678 aaKnown RBP17.05■□□□□ 0.32
LINC00404-201ENST00000418660 EPHX1P07099 455 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 DLDP09622 509 aaKnown RBP17.05■□□□□ 0.32
LINC00404-201ENST00000418660 ZNF18P17022 549 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
LINC00404-201ENST00000418660 SCNN1AP37088 669 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 MATKP42679 507 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 TYRO3Q06418 890 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 LMAN2Q12907 356 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 CDH18Q13634 790 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 NCAPHQ15003 741 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 PTPRNQ16849 979 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 FNDC3BQ53EP0 1204 aaKnown RBP17.05■□□□□ 0.32
LINC00404-201ENST00000418660 LYSMD4Q5XG99 296 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 TCEAL6Q6IPX3 200 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 ARMCX6Q7L4S7 300 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 ZNF677Q86XU0 584 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 TMPRSS6Q8IU80 811 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 CARNMT1Q8N4J0 409 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 EPS8L1Q8TE68 723 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 CYB5D2Q8WUJ1 264 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 TCEAL3Q969E4 200 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 TTC17Q96AE7 1141 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 PRMT1Q99873 361 aaKnown RBP17.05■□□□□ 0.32
LINC00404-201ENST00000418660 TMEM245Q9H330 911 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 ITM2CQ9NQX7 267 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 RRN3Q9NYV6 651 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 COX16Q9P0S2 106 aa17.05■□□□□ 0.32
LINC00404-201ENST00000418660 DCDC2BA2VCK2 349 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 LGALS16A8MUM7 142 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 F5H5T6 163 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 GFPT2O94808 682 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 LUC7L3O95232 432 aaKnown RBP17.04■□□□□ 0.32
LINC00404-201ENST00000418660 MMEP08473 750 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 HLA-EP13747 358 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 SOX5P35711 763 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 COPAP53621 1224 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 JAM2P57087 298 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 NME3Q13232 169 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 CAMK2GQ13555 558 aaPredicted RBP17.04■□□□□ 0.32
LINC00404-201ENST00000418660 SYCP1Q15431 976 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 SYT12Q8IV01 421 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 ABCA7Q8IZY2 2146 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 MSANTD4Q8NCY6 345 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 PRCCQ92733 491 aaPredicted RBP17.04■□□□□ 0.32
LINC00404-201ENST00000418660 SIPA1Q96FS4 1042 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 NAT10Q9H0A0 1025 aaKnown RBP17.04■□□□□ 0.32
LINC00404-201ENST00000418660 NLRC4Q9NPP4 1024 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 CD93Q9NPY3 652 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.04■□□□□ 0.32
LINC00404-201ENST00000418660 KIAA1522Q9P206 1035 aaPredicted RBP17.04■□□□□ 0.32
LINC00404-201ENST00000418660 USP36Q9P275 1121 aaKnown RBP17.04■□□□□ 0.32
LINC00404-201ENST00000418660 NOCTQ9UK39 431 aaKnown RBP17.04■□□□□ 0.32
LINC00404-201ENST00000418660 THADAQ6YHU6 1953 aa17.04■□□□□ 0.32
LINC00404-201ENST00000418660 SDK1Q7Z5N4 2213 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 H0Y626 953 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 M0QYT0 321 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 EPHB6O15197 1021 aa17.03■□□□□ 0.32
LINC00404-201ENST00000418660 NDUFS2O75306 463 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms