RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 BTN2A3PQ96KV6 586 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 SLC2A11Q9BYW1 496 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 FAM204AQ9H8W3 233 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 PRMT8Q9NR22 394 aaPredicted RBP10.91□□□□□ -0.66
RFC1-203ENST00000418436 ARHGEF4Q9NR80 690 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 SEPT11Q9NVA2 429 aaKnown RBP10.91□□□□□ -0.66
RFC1-203ENST00000418436 DDIT4Q9NX09 232 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 TAS2R14Q9NYV8 317 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 PLK2Q9NYY3 685 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 FBXO4Q9UKT5 387 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 STAP1Q9ULZ2 295 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 SLC27A6Q9Y2P4 619 aa10.91□□□□□ -0.66
RFC1-203ENST00000418436 GOLGA6L7A0A1B0GV03 622 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 SIGLEC16A6NMB1 481 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 DDX3XO00571 662 aaKnown RBP eCLIP10.9□□□□□ -0.66
RFC1-203ENST00000418436 LAMTOR5O43504 91 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 F9P00740 461 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 APOEP02649 317 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 CYBBP04839 570 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 SERPING1P05155 500 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 TDGF1P13385 188 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 TFE3P19532 575 aaPredicted RBP10.9□□□□□ -0.66
RFC1-203ENST00000418436 HOXD9P28356 352 aaPredicted RBP10.9□□□□□ -0.66
RFC1-203ENST00000418436 CCR1P32246 355 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 CXCR3P49682 368 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 SULT1E1P49888 294 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 CCR3P51677 355 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 MRPS21P82921 87 aaKnown RBP10.9□□□□□ -0.66
RFC1-203ENST00000418436 KDSRQ06136 332 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 FOXC1Q12948 553 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 MTA1Q13330 715 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 TRIM14Q14142 442 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 ZNF528Q3MIS6 628 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 MS4A13Q5J8X5 152 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 MPP7Q5T2T1 576 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 PIK3R6Q5UE93 754 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 GRAMD4Q6IC98 578 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 PKN3Q6P5Z2 889 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 SFTPA1Q8IWL2 248 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 DRC7Q8IY82 874 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 ATP6V0D2Q8N8Y2 350 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 TERB1Q8NA31 727 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 USP33Q8TEY7 942 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 DDI1Q8WTU0 396 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 NELL1Q92832 810 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 TMA16Q96EY4 203 aaKnown RBP10.9□□□□□ -0.66
RFC1-203ENST00000418436 TBCBQ99426 244 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 PRMT1Q99873 361 aaKnown RBP10.9□□□□□ -0.66
RFC1-203ENST00000418436 DDX50Q9BQ39 737 aaKnown RBP10.9□□□□□ -0.66
RFC1-203ENST00000418436 IRF2BPLQ9H1B7 796 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 METTL5Q9NRN9 209 aaKnown RBP10.9□□□□□ -0.66
RFC1-203ENST00000418436 PIGVQ9NUD9 493 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 DNAJC17Q9NVM6 304 aaKnown RBP10.9□□□□□ -0.66
RFC1-203ENST00000418436 C2orf42Q9NWW7 574 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 XPO7Q9UIA9 1087 aaKnown RBP10.9□□□□□ -0.66
RFC1-203ENST00000418436 CLEC4EQ9ULY5 219 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 STARD13Q9Y3M8 1113 aa10.9□□□□□ -0.66
RFC1-203ENST00000418436 MYO18AQ92614 2054 aaKnown RBP10.89□□□□□ -0.67
RFC1-203ENST00000418436 ANTXRLA6NF34 631 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 C2CD4BA6NLJ0 364 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 H0Y858 1186 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 TSPAN3O60637 253 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 ATG13O75143 517 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 RTN2O75298 545 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 SP9P0CG40 484 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 KRT3P12035 628 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 RFC1P35251 1148 aaPredicted RBP10.89□□□□□ -0.67
RFC1-203ENST00000418436 PTPN9P43378 593 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 KIR2DL1P43626 348 aaPredicted RBP10.89□□□□□ -0.67
RFC1-203ENST00000418436 CXCL12P48061 93 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 DGKGP49619 791 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 SGSHP51688 502 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 SATB1Q01826 763 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 NME3Q13232 169 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 CCDC14Q49A88 953 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 BRMS1LQ5PSV4 323 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 RFWD3Q6PCD5 774 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 WDR59Q6PJI9 974 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 PHLDB2Q86SQ0 1253 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 EMC1Q8N766 993 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 JOSD2Q8TAC2 188 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 RXFP2Q8WXD0 754 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 CENPIQ92674 756 aaPredicted RBP10.89□□□□□ -0.67
RFC1-203ENST00000418436 BHMTQ93088 406 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 MYEOVQ96EZ4 313 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 CFAP57Q96MR6 1250 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 PRICKLE1Q96MT3 831 aaPredicted RBP10.89□□□□□ -0.67
RFC1-203ENST00000418436 DNAJC7Q99615 494 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 ISCUQ9H1K1 167 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 ANLNQ9NQW6 1124 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 ARHGEF38Q9NXL2 777 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 SLC12A6Q9UHW9 1150 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 HCN2Q9UL51 889 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 MUC6Q6W4X9 2439 aa10.89□□□□□ -0.67
RFC1-203ENST00000418436 SYNJ2BP-COX16A0A087WUM0 186 aa10.88□□□□□ -0.67
RFC1-203ENST00000418436 TBC1D3BA6NDS4 549 aa10.88□□□□□ -0.67
RFC1-203ENST00000418436 TMCO5BA8MYB1 307 aa10.88□□□□□ -0.67
RFC1-203ENST00000418436 PRRT4C9JH25 899 aa10.88□□□□□ -0.67
RFC1-203ENST00000418436 I6L893 689 aaPredicted RBP10.88□□□□□ -0.67
RFC1-203ENST00000418436 K7ESF4 209 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms