RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 C1orf210Q8IVY1 113 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 PHTF2Q8N3S3 785 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 KCNV2Q8TDN2 545 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 PANX2Q96RD6 677 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 PRMT1Q99873 361 aaKnown RBP23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 SIK2Q9H0K1 926 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 THAP2Q9H0W7 228 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 STIM2Q9P246 746 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 HS3ST4Q9Y661 456 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 LAMTOR5O43504 91 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 RNF40O75150 1001 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 PSMA2P25787 234 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 ATXN1P54253 815 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 GALCP54803 685 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 MRPS21P82921 87 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 MTAPQ13126 283 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 AUHQ13825 339 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 E2F5Q15329 346 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 C10orf76Q5T2E6 689 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 SH3PXD2AQ5TCZ1 1133 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 LRRC31Q6UY01 552 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 FNIP1Q8TF40 1166 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 NCAPGQ9BPX3 1015 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 NENFQ9UMX5 172 aa23.88■■□□□ 1.41
SMARCB1-205ENST00000417137 CCP110O43303 1012 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 CYP1A2P05177 515 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 H2AFZP0C0S5 128 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 ADRA1BP35368 520 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 CCR3P51677 355 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 RPS24P62847 133 aaKnown RBP23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 FBXL22Q6P050 247 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 Q6ZS52 159 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 H2AFVQ71UI9 128 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 MFN1Q8IWA4 741 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 CTNNBL1Q8WYA6 563 aaPredicted RBP23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 EZH1Q92800 747 aaPredicted RBP23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 P2RY11Q96G91 374 aa23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 PRICKLE1Q96MT3 831 aaPredicted RBP23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 RPRD1AQ96P16 312 aaPredicted RBP23.87■■□□□ 1.41
SMARCB1-205ENST00000417137 CHURC1-FNTBB4DL54 471 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 TRIM24O15164 1050 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 TIMM44O43615 452 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 RNF8O76064 485 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 CXCL12P48061 93 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 SGSHP51688 502 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 SEC13P55735 322 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 HDAC4P56524 1084 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 MESP2Q0VG99 397 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 HSF5Q4G112 596 aaPredicted RBP23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 RNF43Q68DV7 783 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 SCYL2Q6P3W7 929 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 ANKS1BQ7Z6G8 1248 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 CCDC170Q8IYT3 715 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 CFAP52Q8N1V2 620 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 FIBINQ8TAL6 211 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 UCMAQ8WVF2 138 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 ACDQ96AP0 544 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 IRF2BPLQ9H1B7 796 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 VANGL2Q9ULK5 521 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 STARD13Q9Y3M8 1113 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 ZDBF2Q9HCK1 2354 aa23.86■■□□□ 1.41
SMARCB1-205ENST00000417137 H0Y626 953 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 AIF1P55008 147 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 CDH18Q13634 790 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 ACAP1Q15027 740 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 C2orf27AQ580R0 203 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 TRMT11Q7Z4G4 463 aaKnown RBP23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 SLFN11Q7Z7L1 901 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 CARNMT1Q8N4J0 409 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 RPLP0P6Q8NHW5 317 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 WFIKKN2Q8TEU8 576 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 USP33Q8TEY7 942 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 NTAN1Q96AB6 310 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 ANLNQ9NQW6 1124 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 CLEC4EQ9ULY5 219 aa23.85■■□□□ 1.41
SMARCB1-205ENST00000417137 LUC7L3O95232 432 aaKnown RBP23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 OXCT1P55809 520 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 OGDHQ02218 1023 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 GAS6Q14393 721 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 EIF4HQ15056 248 aaKnown RBP23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 TMTC1Q8IUR5 882 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 MYEOVQ96EZ4 313 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 PPP1R9BQ96SB3 815 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 NUP85Q9BW27 656 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 OSBPL2Q9H1P3 480 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 SPTLC3Q9NUV7 552 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 FBXO4Q9UKT5 387 aa23.84■■□□□ 1.41
SMARCB1-205ENST00000417137 MYOFQ9NZM1 2061 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 A0A1B0GVM2 712 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 TCAF2A6NFQ2 919 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 CLDN11O75508 207 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 TMEM253P0C7T8 217 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 TIE1P35590 1138 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 CYLC1P35663 651 aaPredicted RBP23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 KIR2DL1P43626 348 aaPredicted RBP23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 PIGHQ14442 188 aaPredicted RBP23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 ANGPT1Q15389 498 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 C5orf22Q49AR2 442 aa23.83■■□□□ 1.41
SMARCB1-205ENST00000417137 RAB6CQ53S08 254 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms