RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TBX4P57082 545 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 ZBTB16Q05516 673 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 RING1Q06587 406 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 NUGGCQ68CJ6 796 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 NADSYN1Q6IA69 706 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 DBX2Q6ZNG2 339 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 SLCO6A1Q86UG4 719 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 UNC45BQ8IWX7 931 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 LMO3Q8TAP4 145 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 SETD7Q8WTS6 366 aaKnown RBP15.41■□□□□ 0.06
RPS28-201ENST00000417088 CLEC4CQ8WTT0 213 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 SNX19Q92543 992 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 LMLNQ96KR4 655 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 HSFY1Q96LI6 401 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 CEP63Q96MT8 703 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 GTPBP4Q9BZE4 634 aaKnown RBP15.41■□□□□ 0.06
RPS28-201ENST00000417088 FBRSQ9HAH7 460 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 APOBEC2Q9Y235 224 aaKnown RBP15.41■□□□□ 0.06
RPS28-201ENST00000417088 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.41■□□□□ 0.06
RPS28-201ENST00000417088 ANKRD11Q6UB99 2663 aaPredicted RBP15.41■□□□□ 0.06
RPS28-201ENST00000417088 MUC22E2RYF6 1773 aaPredicted RBP15.41■□□□□ 0.06
RPS28-201ENST00000417088 ATRXP46100 2492 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 DSPP15924 2871 aaKnown RBP15.4■□□□□ 0.06
RPS28-201ENST00000417088 FREM2Q5SZK8 3169 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 GOLGA6L4A6NEF3 574 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 M0QYV0 167 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 PSMA7O14818 248 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 IRAK2O43187 625 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 FYNP06241 537 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
RPS28-201ENST00000417088 POLR2EP19388 210 aaKnown RBP15.4■□□□□ 0.06
RPS28-201ENST00000417088 AFF3P51826 1226 aaKnown RBP15.4■□□□□ 0.06
RPS28-201ENST00000417088 ISM2Q6H9L7 571 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 PPM1KQ8N3J5 372 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 AZIN2Q96A70 460 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 MYEOVQ96EZ4 313 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 DHTKD1Q96HY7 919 aaPredicted RBP15.4■□□□□ 0.06
RPS28-201ENST00000417088 TIGD1Q96MW7 591 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 BTBD1Q9H0C5 482 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 MTG2Q9H4K7 406 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 OSGEPQ9NPF4 335 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 SUN2Q9UH99 717 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 PCDHGB2Q9Y5G2 931 aa15.4■□□□□ 0.06
RPS28-201ENST00000417088 FBXO21O94952 628 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 SEMA4FO95754 770 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 DNTTP04053 509 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 SCAPQ12770 1279 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 STIM1Q13586 685 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 STILQ15468 1287 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 KIF19Q2TAC6 998 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 CCDC40Q4G0X9 1142 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 CCNI2Q6ZMN8 369 aaPredicted RBP15.39■□□□□ 0.05
RPS28-201ENST00000417088 RRAGAQ7L523 313 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 ARHGEF19Q8IW93 802 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 MFN1Q8IWA4 741 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 FIBINQ8TAL6 211 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 BAHD1Q8TBE0 780 aaPredicted RBP15.39■□□□□ 0.05
RPS28-201ENST00000417088 GOLGA1Q92805 767 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 TTC17Q96AE7 1141 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 BIRC7Q96CA5 298 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 MYO19Q96H55 970 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 FCRL2Q96LA5 508 aaPredicted RBP15.39■□□□□ 0.05
RPS28-201ENST00000417088 PRICKLE1Q96MT3 831 aaPredicted RBP15.39■□□□□ 0.05
RPS28-201ENST00000417088 MIS12Q9H081 205 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 TM9SF3Q9HD45 589 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 KIAA1522Q9P206 1035 aaPredicted RBP15.39■□□□□ 0.05
RPS28-201ENST00000417088 STIM2Q9P246 746 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 INTS6Q9UL03 887 aaKnown RBP15.39■□□□□ 0.05
RPS28-201ENST00000417088 SNX11Q9Y5W9 270 aa15.39■□□□□ 0.05
RPS28-201ENST00000417088 P4HA2O15460 535 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 FLRT2O43155 660 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 FSBPO95073 299 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 RPL34P49207 117 aaKnown RBP15.38■□□□□ 0.05
RPS28-201ENST00000417088 RPS24P62847 133 aaKnown RBP15.38■□□□□ 0.05
RPS28-201ENST00000417088 TTC31Q49AM3 519 aaPredicted RBP15.38■□□□□ 0.05
RPS28-201ENST00000417088 ZNF776Q68DI1 518 aaPredicted RBP15.38■□□□□ 0.05
RPS28-201ENST00000417088 TTI2Q6NXR4 508 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 PROSER1Q86XN7 944 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 ZNF557Q8N988 423 aaPredicted RBP15.38■□□□□ 0.05
RPS28-201ENST00000417088 HJURPQ8NCD3 748 aaPredicted RBP15.38■□□□□ 0.05
RPS28-201ENST00000417088 DQX1Q8TE96 717 aaKnown RBP15.38■□□□□ 0.05
RPS28-201ENST00000417088 RHBDD1Q8TEB9 315 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 MRGPRX3Q96LB0 322 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 ORAI3Q9BRQ5 295 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 RSPH9Q9H1X1 276 aaPredicted RBP15.38■□□□□ 0.05
RPS28-201ENST00000417088 SGK2Q9HBY8 427 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 TOR4AQ9NXH8 423 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 HOOK1Q9UJC3 728 aaKnown RBP15.38■□□□□ 0.05
RPS28-201ENST00000417088 MAN1B1Q9UKM7 699 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 BTBD3Q9Y2F9 522 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 ANKRD6Q9Y2G4 727 aa15.38■□□□□ 0.05
RPS28-201ENST00000417088 KCNK3O14649 394 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 ATXN1LP0C7T5 689 aaKnown RBP15.37■□□□□ 0.05
RPS28-201ENST00000417088 BMP6P22004 513 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 CD27P26842 260 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 CSKP41240 450 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 GPD2P43304 727 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 GRIA4P48058 902 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 ST8SIA6P61647 398 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 GCNT1Q02742 428 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms