RNA–Protein interactions for RNA: ENST00000416065.1

RABEPK-205, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 3

Gene RABEPK, Length 733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-205ENST00000416065 STK32AQ8WU08 396 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 HMGB4Q8WW32 186 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 BHMTQ93088 406 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 WBP2Q969T9 261 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 SPAG5Q96R06 1193 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 ZSWIM1Q9BR11 485 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 SIX2Q9NPC8 291 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 ACP6Q9NPH0 428 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 DNAJC17Q9NVM6 304 aaKnown RBP13.36□□□□□ -0.27
RABEPK-205ENST00000416065 SUSD2Q9UGT4 822 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 PILRBQ9UKJ0 227 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 SLC6A14Q9UN76 642 aa13.36□□□□□ -0.27
RABEPK-205ENST00000416065 HBS1LQ9Y450 684 aaKnown RBP13.36□□□□□ -0.27
RABEPK-205ENST00000416065 USP9XQ93008 2570 aaPredicted RBP13.36□□□□□ -0.27
RABEPK-205ENST00000416065 MYO18AQ92614 2054 aaKnown RBP13.36□□□□□ -0.27
RABEPK-205ENST00000416065 SERPINF2P08697 491 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 HOXB2P14652 356 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 TYRP14679 529 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 HNRNPLP14866 589 aaKnown RBP eCLIP13.35□□□□□ -0.271e-6■■□□□ 12.3
RABEPK-205ENST00000416065 UCHL3P15374 230 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 PI4KAP42356 2102 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 COPB1P53618 953 aaKnown RBP13.35□□□□□ -0.27
RABEPK-205ENST00000416065 KCNMA1Q12791 1236 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 OR6B2Q6IFH4 312 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 METTL3Q86U44 580 aaKnown RBP13.35□□□□□ -0.27
RABEPK-205ENST00000416065 UNC45BQ8IWX7 931 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 PGBD3Q8N328 593 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 MSANTD4Q8NCY6 345 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 NEK11Q8NG66 645 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 MDM1Q8TC05 714 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 IPO4Q8TEX9 1081 aaKnown RBP13.35□□□□□ -0.27
RABEPK-205ENST00000416065 DDI1Q8WTU0 396 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 PPP1R13BQ96KQ4 1090 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 GABRG3Q99928 467 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 FAM207AQ9NSI2 230 aaPredicted RBP13.35□□□□□ -0.27
RABEPK-205ENST00000416065 FHOD1Q9Y613 1164 aa13.35□□□□□ -0.27
RABEPK-205ENST00000416065 A0A087WV48 116 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 ARHGAP6O43182 974 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 ENGP17813 658 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 CLCN1P35523 988 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 SLC11A2P49281 568 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 DGKGP49619 791 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 TBX4P57082 545 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
RABEPK-205ENST00000416065 RPL6Q02878 288 aaKnown RBP13.34□□□□□ -0.27
RABEPK-205ENST00000416065 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
RABEPK-205ENST00000416065 SLC14A1Q13336 389 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 SYCP1Q15431 976 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 EFHC1Q5JVL4 640 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 NUGGCQ68CJ6 796 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 SLC47A2Q86VL8 602 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 CCDC117Q8IWD4 279 aaPredicted RBP13.34□□□□□ -0.27
RABEPK-205ENST00000416065 TMEM35BQ8NCS4 154 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 CLEC4CQ8WTT0 213 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 FOXJ1Q92949 421 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 RNF34Q969K3 372 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 DDX50Q9BQ39 737 aaKnown RBP13.34□□□□□ -0.27
RABEPK-205ENST00000416065 SLC4A5Q9BY07 1137 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 STK33Q9BYT3 514 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 LHX5Q9H2C1 402 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 NLRC4Q9NPP4 1024 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 PLCB1Q9NQ66 1216 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 PLK2Q9NYY3 685 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 LIMA1Q9UHB6 759 aaKnown RBP13.34□□□□□ -0.27
RABEPK-205ENST00000416065 PCDHGC3Q9UN70 934 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 INVSQ9Y283 1065 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 DAAM1Q9Y4D1 1078 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 CELSR3Q9NYQ7 3312 aa13.34□□□□□ -0.27
RABEPK-205ENST00000416065 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 TYW5A2RUC4 315 aaKnown RBP13.33□□□□□ -0.28
RABEPK-205ENST00000416065 E5RJQ4 531 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 MSI1O43347 362 aaKnown RBP13.33□□□□□ -0.28
RABEPK-205ENST00000416065 GREM1O60565 184 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 OPHN1O60890 802 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 SYPP08247 313 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 PNMA6AP0CW24 399 aaPredicted RBP13.33□□□□□ -0.28
RABEPK-205ENST00000416065 GABRG2P18507 467 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 PTGER3P43115 390 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 ZNF165P49910 485 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 YWHAZP63104 245 aaKnown RBP13.33□□□□□ -0.28
RABEPK-205ENST00000416065 ARID5AQ03989 594 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 MESP2Q0VG99 397 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 PDCLQ13371 301 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 KLHL40Q2TBA0 621 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 SKOR2Q2VWA4 1001 aaPredicted RBP13.33□□□□□ -0.28
RABEPK-205ENST00000416065 MPPE1Q53F39 396 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 SYCP2LQ5T4T6 812 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 EMC10Q5UCC4 262 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 TAF3Q5VWG9 929 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 Q6ZNB5 142 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 TOGARAM2Q6ZUX3 1019 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 TMEFF1Q8IYR6 380 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 FAM71AQ8IYT1 594 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 CHPFQ8IZ52 775 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 RLN3Q8WXF3 142 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 SERPINB11Q96P15 392 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 ZDHHC5Q9C0B5 715 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 POPDC2Q9HBU9 364 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 CALCOCO1Q9P1Z2 691 aa13.33□□□□□ -0.28
RABEPK-205ENST00000416065 SLC12A6Q9UHW9 1150 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms