RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 GRIA4P48058 902 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 RAD23BP54727 409 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 ARID5AQ03989 594 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 KCNH2Q12809 1159 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 CAMK2GQ13555 558 aaPredicted RBP13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 TEAD4Q15561 434 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 SMAD1Q15797 465 aaKnown RBP13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 SGO2Q562F6 1265 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 KCNT1Q5JUK3 1230 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 PPM1KQ8N3J5 372 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 ZNF276Q8N554 614 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 PDCD7Q8N8D1 485 aaKnown RBP13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 SLC4A11Q8NBS3 891 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 EHBP1Q8NDI1 1231 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 PIP4K2CQ8TBX8 421 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 DDI1Q8WTU0 396 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 CYB5D2Q8WUJ1 264 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 BIRC7Q96CA5 298 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 CDK5RAP1Q96SZ6 601 aaKnown RBP13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 ARID3AQ99856 593 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 UBXN6Q9BZV1 441 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 PCDHB4Q9Y5E5 795 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 USP3Q9Y6I4 520 aa13.8□□□□□ -0.2
CTHRC1-202ENST00000415886 SLC12A8A0AV02 714 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 PLK4O00444 970 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 PMM2O15305 246 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 FSBPO95073 299 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 VDRP11473 427 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 ABCG1P45844 678 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 CCT8P50990 548 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 CLDN6P56747 220 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 E2F5Q15329 346 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 FNDC3BQ53EP0 1204 aaKnown RBP13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 ARHGAP17Q68EM7 881 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 TMEM270Q6UE05 265 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 CPXM2Q8N436 756 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 ANKRD52Q8NB46 1076 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 CLSTN2Q9H4D0 955 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 LRRC4Q9HBW1 653 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 MARCH2Q9P0N8 246 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 APC2O95996 2303 aa13.79□□□□□ -0.2
CTHRC1-202ENST00000415886 PCDHGA12O60330 932 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 TSPAN3O60637 253 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 SEMA4FO95754 770 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 HOXD9P28356 352 aaPredicted RBP13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 HLA-FP30511 346 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 RSRC2Q7L4I2 434 aaKnown RBP13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 TRIM59Q8IWR1 403 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 FAM217AQ8IXS0 508 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 IPO9Q96P70 1041 aaKnown RBP13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 UBL7Q96S82 380 aaPredicted RBP13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 SLC2A11Q9BYW1 496 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 BTBD1Q9H0C5 482 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 NUP62CLQ9H1M0 184 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 TMEM245Q9H330 911 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 FTSJ1Q9UET6 329 aa13.78□□□□□ -0.2
CTHRC1-202ENST00000415886 TIMM44O43615 452 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 C1QL1O75973 258 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 PAEPP09466 180 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 CD27P26842 260 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 ITPKBP27987 946 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 CTSKP43235 329 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 MARSP56192 900 aaKnown RBP13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 RPS14P62263 151 aaKnown RBP13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 NUMA1Q14980 2115 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 GOLGA7BQ2TAP0 167 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 CHST9Q7L1S5 443 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 RRAGAQ7L523 313 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 ADAT2Q7Z6V5 191 aaKnown RBP13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 PIGZQ86VD9 579 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 FAM114A1Q8IWE2 563 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 COL26A1Q96A83 441 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 PLD4Q96BZ4 506 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 ORAI3Q9BRQ5 295 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 TSPAN16Q9UKR8 245 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 STRIP2Q9ULQ0 834 aa13.77□□□□□ -0.21
CTHRC1-202ENST00000415886 ACACAQ13085 2346 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 E9PAM4 449 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 CBX4O00257 560 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 DNTTP04053 509 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 C7P10643 843 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 KRT5P13647 590 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 TKTL1P51854 596 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 BCAT1P54687 386 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 YWHAGP61981 247 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 C19orf57Q0VDD7 668 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 BST2Q10589 180 aaKnown RBP13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 INAVAQ3KP66 663 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 MPPE1Q53F39 396 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 PRAMEF14Q5SWL7 426 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 ADIPOR2Q86V24 386 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 TMPRSS12Q86WS5 348 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 GATAD2AQ86YP4 633 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 SIX6OS1Q8N1H7 587 aa13.76□□□□□ -0.21
CTHRC1-202ENST00000415886 UBA3Q8TBC4 463 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms