RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 HOXB2P14652 356 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 CYP11B1P15538 503 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 ZNF18P17022 549 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 HOXD9P28356 352 aaPredicted RBP9.98□□□□□ -0.81
LINC01090-201ENST00000415357 SLC6A4P31645 630 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 CNR2P34972 360 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 KRT9P35527 623 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 POLR2FP61218 127 aaKnown RBP9.98□□□□□ -0.81
LINC01090-201ENST00000415357 SPEM2Q0P670 501 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 CCDC6Q16204 474 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 PREPLQ4J6C6 727 aaPredicted RBP9.98□□□□□ -0.81
LINC01090-201ENST00000415357 FAM133BQ5BKY9 247 aaKnown RBP9.98□□□□□ -0.81
LINC01090-201ENST00000415357 EOGTQ5NDL2 527 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 LAIR1Q6GTX8 287 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 NADSYN1Q6IA69 706 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 OR6B2Q6IFH4 312 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 NOP9Q86U38 636 aaKnown RBP9.98□□□□□ -0.81
LINC01090-201ENST00000415357 RASSF3Q86WH2 238 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 HMGB4Q8WW32 186 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 MYEOVQ96EZ4 313 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 FCRL2Q96LA5 508 aaPredicted RBP9.98□□□□□ -0.81
LINC01090-201ENST00000415357 SERPINB11Q96P15 392 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 NLRC4Q9NPP4 1024 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 FAM207AQ9NSI2 230 aaPredicted RBP9.98□□□□□ -0.81
LINC01090-201ENST00000415357 CACNA2D2Q9NY47 1150 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 EBF1Q9UH73 591 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 XPO7Q9UIA9 1087 aaKnown RBP9.98□□□□□ -0.81
LINC01090-201ENST00000415357 USP18Q9UMW8 372 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 SIK3Q9Y2K2 1263 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 STARD13Q9Y3M8 1113 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 RAD54BQ9Y620 910 aa9.98□□□□□ -0.81
LINC01090-201ENST00000415357 SYNJ2BP-COX16A0A087WUM0 186 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 A0A1W2PQF6 199 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 LGALS16A8MUM7 142 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 WASH3PC4AMC7 463 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 IRAK2O43187 625 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 ACSL4O60488 711 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 GFPT2O94808 682 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 LATS1O95835 1130 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 TPM2P07951 284 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 ATP1A3P13637 1013 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 BCKDHBP21953 392 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 TGM1P22735 817 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 NTSR1P30989 418 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 RING1Q06587 406 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 CBLBQ13191 982 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 SYCP1Q15431 976 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 HSF5Q4G112 596 aaPredicted RBP9.97□□□□□ -0.81
LINC01090-201ENST00000415357 MPPE1Q53F39 396 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 C2CD6Q53TS8 623 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 ZC3H12AQ5D1E8 599 aaKnown RBP9.97□□□□□ -0.81
LINC01090-201ENST00000415357 FKBP15Q5T1M5 1219 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 ADGRF1Q5T601 910 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 NUGGCQ68CJ6 796 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 TMEM215Q68D42 235 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 KIAA1211LQ6NV74 962 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 APTXQ7Z2E3 356 aaKnown RBP9.97□□□□□ -0.81
LINC01090-201ENST00000415357 ANKS1BQ7Z6G8 1248 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 CHPFQ8IZ52 775 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 DEFB106AQ8N104 65 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 FRMD1Q8N878 549 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 WFDC5Q8TCV5 224 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 SLC20A1Q8WUM9 679 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 RLN3Q8WXF3 142 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 SORCS1Q8WY21 1168 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 DDX1Q92499 740 aaKnown RBP9.97□□□□□ -0.81
LINC01090-201ENST00000415357 SLC39A13Q96H72 371 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 PRICKLE1Q96MT3 831 aaPredicted RBP9.97□□□□□ -0.81
LINC01090-201ENST00000415357 STK33Q9BYT3 514 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 ZMYND15Q9H091 742 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 NUCKS1Q9H1E3 243 aaKnown RBP9.97□□□□□ -0.81
LINC01090-201ENST00000415357 SLC6A17Q9H1V8 727 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 LHX5Q9H2C1 402 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 PDCL3Q9H2J4 239 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 ALG2Q9H553 416 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 POPDC2Q9HBU9 364 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 POLMQ9NP87 494 aaPredicted RBP9.97□□□□□ -0.81
LINC01090-201ENST00000415357 COX16Q9P0S2 106 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 STIM2Q9P246 746 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 BCCIPQ9P287 314 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC01090-201ENST00000415357 LIMA1Q9UHB6 759 aaKnown RBP9.97□□□□□ -0.81
LINC01090-201ENST00000415357 STOML2Q9UJZ1 356 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 SLC27A6Q9Y2P4 619 aa9.97□□□□□ -0.81
LINC01090-201ENST00000415357 TBL1XO60907 577 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 ALDH1A2O94788 518 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 TRUB2O95900 331 aaKnown RBP9.96□□□□□ -0.82
LINC01090-201ENST00000415357 IGLV3-25P01717 112 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 RETP07949 1114 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 MMEP08473 750 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 GABRG2P18507 467 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 CDK11BP21127 795 aaKnown RBP9.96□□□□□ -0.82
LINC01090-201ENST00000415357 HLA-FP30511 346 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 GBP1P32455 592 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 IL12RB1P42701 662 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 SLC11A2P49281 568 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 BPIFB4P59827 614 aa9.96□□□□□ -0.82
LINC01090-201ENST00000415357 RPS24P62847 133 aaKnown RBP9.96□□□□□ -0.82
LINC01090-201ENST00000415357 YWHAZP63104 245 aaKnown RBP9.96□□□□□ -0.82
LINC01090-201ENST00000415357 UBXN1Q04323 297 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms