RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 HMBSP08397 361 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 DUSP3P51452 185 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-208ENST00000414711 FOXK1P85037 733 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 GPRIN1Q7Z2K8 1008 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 TRAPPC11Q7Z392 1133 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 TADA2BQ86TJ2 420 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 WDR49Q8IV35 697 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 GPD1LQ8N335 351 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 CPXM2Q8N436 756 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 ARL14Q8N4G2 192 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 GRAMD1AQ96CP6 724 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 DCLK3Q9C098 648 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 SLC25A18Q9H1K4 315 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 MTG2Q9H4K7 406 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 MRPL44Q9H9J2 332 aaKnown RBP16.48■□□□□ 0.23
CPNE1-208ENST00000414711 TPX2Q9ULW0 747 aaKnown RBP16.48■□□□□ 0.23
CPNE1-208ENST00000414711 C2CD3Q4AC94 2353 aa16.48■□□□□ 0.23
CPNE1-208ENST00000414711 MID1O15344 667 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 MAGEC1O60732 1142 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 DLDP09622 509 aaKnown RBP16.47■□□□□ 0.23
CPNE1-208ENST00000414711 CCDC130P13994 396 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 HOXD9P28356 352 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-208ENST00000414711 MAP3K7CLP57077 242 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 CST6Q15828 149 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 FOXR1Q6PIV2 292 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 ADIPOR2Q86V24 386 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 IQCHQ86VS3 1027 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 DENND1CQ8IV53 801 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 SYCP3Q8IZU3 236 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 TNIP3Q96KP6 325 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 OMDQ99983 421 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 LRRC4CQ9HCJ2 640 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 CSNK1G1Q9HCP0 422 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 ABCB8Q9NUT2 735 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 UCKL1Q9NWZ5 548 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 SUN2Q9UH99 717 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 RASAL2Q9UJF2 1139 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 ENTPD2Q9Y5L3 495 aa16.47■□□□□ 0.23
CPNE1-208ENST00000414711 ICE1Q9Y2F5 2266 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 LATO43561 262 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 RNASEH1O60930 286 aaKnown RBP16.46■□□□□ 0.23
CPNE1-208ENST00000414711 TNFSF15O95150 251 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 GCNT3O95395 438 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-208ENST00000414711 DGKAP23743 735 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 MLLT3P42568 568 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-208ENST00000414711 ADPRHP54922 357 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 PPP2CBP62714 309 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 PPP2CAP67775 309 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 COG7P83436 770 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 EHHADHQ08426 723 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 OVGP1Q12889 678 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 SURF1Q15526 300 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 IGFBP7Q16270 282 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 ZC3H3Q8IXZ2 948 aaKnown RBP16.46■□□□□ 0.23
CPNE1-208ENST00000414711 AHI1Q8N157 1196 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 JAKMIP2Q96AA8 810 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 APOLD1Q96LR9 279 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 SMYD3Q9H7B4 428 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 TBC1D7Q9P0N9 293 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 GGA2Q9UJY4 613 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 NAGPAQ9UK23 515 aa16.46■□□□□ 0.23
CPNE1-208ENST00000414711 COL27A1Q8IZC6 1860 aaPredicted RBP16.46■□□□□ 0.22
CPNE1-208ENST00000414711 ATP5BP06576 529 aaKnown RBP16.45■□□□□ 0.22
CPNE1-208ENST00000414711 UBA7P41226 1012 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 RIPPLY3P57055 190 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 MBLAC2Q68D91 279 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 CBWD2Q8IUF1 395 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 FAM217AQ8IXS0 508 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 OR14C36Q8NHC7 312 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 RASSF8Q8NHQ8 419 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 IFI44Q8TCB0 444 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 SLC2A14Q8TDB8 520 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 LARP4BQ92615 738 aaKnown RBP16.45■□□□□ 0.22
CPNE1-208ENST00000414711 LIN37Q96GY3 246 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-208ENST00000414711 AK8Q96MA6 479 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 EVA1BQ9NVM1 165 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 SEL1LQ9UBV2 794 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 PCDHA5Q9Y5H7 936 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 ITPR2Q14571 2701 aa16.45■□□□□ 0.22
CPNE1-208ENST00000414711 LY6G6EA0A0G2JKS1 128 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 ZNF233A6NK53 670 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 SIN3BO75182 1162 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 ITGA2BP08514 1039 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 THEGLP0DJG4 465 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 GIMD1P0DJR0 217 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 ALPPL2P10696 532 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 PABPC1P11940 636 aaKnown RBP16.44■□□□□ 0.22
CPNE1-208ENST00000414711 TGM2P21980 687 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 CASP5P51878 434 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 SRSF6Q13247 344 aaKnown RBP16.44■□□□□ 0.22
CPNE1-208ENST00000414711 RABEP1Q15276 862 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 TBR1Q16650 682 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 SKIDA1Q1XH10 827 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 PTRH1Q86Y79 214 aaKnown RBP16.44■□□□□ 0.22
CPNE1-208ENST00000414711 MMAAQ8IVH4 418 aaKnown RBP16.44■□□□□ 0.22
CPNE1-208ENST00000414711 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.44■□□□□ 0.22
CPNE1-208ENST00000414711 ZNF564Q8TBZ8 553 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-208ENST00000414711 CDK5RAP1Q96SZ6 601 aaKnown RBP16.44■□□□□ 0.22
CPNE1-208ENST00000414711 USP29Q9HBJ7 922 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms