RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RPRD1AQ96P16 312 aaPredicted RBP15.22■□□□□ 0.03
CHD1-202ENST00000414220 PARVAQ9NVD7 372 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 ELOVL2Q9NXB9 296 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 KIAA1522Q9P206 1035 aaPredicted RBP15.22■□□□□ 0.03
CHD1-202ENST00000414220 BCCIPQ9P287 314 aaKnown RBP eCLIP15.22■□□□□ 0.03
CHD1-202ENST00000414220 GGA2Q9UJY4 613 aa15.22■□□□□ 0.03
CHD1-202ENST00000414220 TMCO5BA8MYB1 307 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 PRRT4C9JH25 899 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 AXIN1O15169 862 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 RTN2O75298 545 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 PAGE1O75459 146 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 LUC7L3O95232 432 aaKnown RBP15.21■□□□□ 0.03
CHD1-202ENST00000414220 LMNAP02545 664 aaKnown RBP15.21■□□□□ 0.03
CHD1-202ENST00000414220 MYBL1P10243 752 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 PABPC1P11940 636 aaKnown RBP15.21■□□□□ 0.03
CHD1-202ENST00000414220 SKILP12757 684 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 HOXB2P14652 356 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 HNRNPLP14866 589 aaKnown RBP eCLIP15.21■□□□□ 0.03
CHD1-202ENST00000414220 GPD1P21695 349 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 FLT3P36888 993 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 PTPN9P43378 593 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 FNTBP49356 437 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 ATP11AP98196 1134 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 USP39Q53GS9 565 aaKnown RBP15.21■□□□□ 0.03
CHD1-202ENST00000414220 NADSYN1Q6IA69 706 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 CEP68Q76N32 757 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 CHST9Q7L1S5 443 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 MON1BQ7L1V2 547 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 STRADAQ7RTN6 431 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 ZNF571Q7Z3V5 609 aaPredicted RBP15.21■□□□□ 0.03
CHD1-202ENST00000414220 C11orf74Q86VG3 221 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 MCOLN2Q8IZK6 566 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 PGBD3Q8N328 593 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 EMC1Q8N766 993 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 C1orf74Q96LT6 269 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 CFAP57Q96MR6 1250 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 HHIPQ96QV1 700 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 TRIM5Q9C035 493 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 SIK2Q9H0K1 926 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 MRPL47Q9HD33 250 aaKnown RBP15.21■□□□□ 0.03
CHD1-202ENST00000414220 PIGVQ9NUD9 493 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 ABCB8Q9NUT2 735 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 ARHGEF38Q9NXL2 777 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 EBF1Q9UH73 591 aa15.21■□□□□ 0.03
CHD1-202ENST00000414220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.2■□□□□ 0.02
CHD1-202ENST00000414220 C2CD4BA6NLJ0 364 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 SGK1O00141 431 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 SYNCRIPO60506 623 aaKnown RBP15.2■□□□□ 0.02
CHD1-202ENST00000414220 LILRB5O75023 590 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 FTLP02792 175 aaPredicted RBP15.2■□□□□ 0.02
CHD1-202ENST00000414220 TDGF1P13385 188 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 CASP14P31944 242 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 ST8SIA6P61647 398 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 RPS24P62847 133 aaKnown RBP15.2■□□□□ 0.02
CHD1-202ENST00000414220 MESP2Q0VG99 397 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 PTP4A2Q12974 167 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 ZNF177Q13360 481 aaPredicted RBP15.2■□□□□ 0.02
CHD1-202ENST00000414220 SLC12A1Q13621 1099 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 AUHQ13825 339 aaKnown RBP15.2■□□□□ 0.02
CHD1-202ENST00000414220 CDO1Q16878 200 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 GEN1Q17RS7 908 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 DRC7Q8IY82 874 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 CFAP52Q8N1V2 620 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHD1-202ENST00000414220 HAPLN3Q96S86 360 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 THAP10Q9P2Z0 257 aaPredicted RBP15.2■□□□□ 0.02
CHD1-202ENST00000414220 XPO7Q9UIA9 1087 aaKnown RBP15.2■□□□□ 0.02
CHD1-202ENST00000414220 SCINQ9Y6U3 715 aa15.2■□□□□ 0.02
CHD1-202ENST00000414220 A0A1B0GVM2 712 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 TCAF2A6NFQ2 919 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 CLDN11O75508 207 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 ENDOD1O94919 500 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 ASLP04424 464 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 GYPCP04921 128 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 RRM1P23921 792 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 HLA-FP30511 346 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 RFC1P35251 1148 aaPredicted RBP15.19■□□□□ 0.02
CHD1-202ENST00000414220 NNMTP40261 264 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 SIM2Q14190 667 aaPredicted RBP15.19■□□□□ 0.02
CHD1-202ENST00000414220 RNF219Q5W0B1 726 aaPredicted RBP15.19■□□□□ 0.02
CHD1-202ENST00000414220 EGFLAMQ63HQ2 1017 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 ANO7Q6IWH7 933 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 FBXL22Q6P050 247 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 WDR59Q6PJI9 974 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 PRR23BQ6ZRT6 265 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 SFTPA1Q8IWL2 248 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 OR8K1Q8NGG5 319 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 PRICKLE1Q96MT3 831 aaPredicted RBP15.19■□□□□ 0.02
CHD1-202ENST00000414220 NCAPGQ9BPX3 1015 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 SYT11Q9BT88 431 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 DEF6Q9H4E7 631 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 ADAMTS1Q9UHI8 967 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 VANGL2Q9ULK5 521 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 CLEC4EQ9ULY5 219 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 HS3ST4Q9Y661 456 aa15.19■□□□□ 0.02
CHD1-202ENST00000414220 TCRBV21S2A2A0A5A6 115 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 GFRA3O60609 400 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 RPP40O75818 363 aaKnown RBP15.18■□□□□ 0.02
CHD1-202ENST00000414220 ADCY5O95622 1261 aa15.18■□□□□ 0.02
CHD1-202ENST00000414220 WASP42768 502 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms