RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 DECR2Q9NUI1 292 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM184CQ9NVA4 438 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.78□□□□□ -1.81e-9■■□□□ 13.3
SF3B1-203ENST00000414174 CFAP97Q9P2B7 532 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SRRDQ9UH36 339 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SLC7A8Q9UHI5 535 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 DPP7Q9UHL4 492 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CPSF3Q9UKF6 684 aaKnown RBP3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PALD1Q9ULE6 856 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ZNRF3Q9ULT6 936 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 CAMK2AQ9UQM7 478 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 NAALADL1Q9UQQ1 740 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 SIK3Q9Y2K2 1263 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 PCDHGA2Q9Y5H1 932 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ATP23Q9Y6H3 246 aa3.78□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF536O15090 1300 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SH3TC1Q8TE82 1336 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 MYO15BQ96JP2 1530 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PTPDC1A2A3K4 754 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 FAM86C2PA6NEL3 165 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 E9PBE3 544 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 H0YCG3 227 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 K7ERQ8 282 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 DVL2O14641 736 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 IFIT3O14879 490 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 ANGPT2O15123 496 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 WDR46O15213 610 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CYP27B1O15528 508 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 FFAR2O15552 330 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SIGLEC6O43699 453 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PCDHGA12O60330 932 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 FKTNO75072 461 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 GUCY1B2O75343 617 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CLEC3AO75596 197 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 IDH1O75874 414 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 BCAS2O75934 225 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 IPO13O94829 963 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 GGPS1O95749 300 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CLPTM1O96005 669 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 GLAP06280 429 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 GSNP06396 782 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SYPP08247 313 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PRG2P13727 222 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 POU2F1P14859 743 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 NAGAP17050 411 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 RPL10P27635 214 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PEX2P28328 305 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CDC25CP30307 473 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 ACSL1P33121 698 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 LSP1P33241 339 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 GCKP35557 465 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 ADCY8P40145 1251 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 ME1P48163 572 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PCP4P48539 62 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 STARP49675 285 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 GDI2P50395 445 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CCR3P51677 355 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 LUMP51884 338 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 MAPK10P53779 464 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 GSDMDP57764 484 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 EIF3EP60228 445 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 RAC3P60763 192 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CREB5Q02930 508 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 LRMPQ12912 555 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 RPA4Q13156 261 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 MAPK7Q13164 816 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PLD1Q13393 1074 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PLS1Q14651 629 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 RFTN1Q14699 578 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 STARD3Q14849 445 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 ZYXQ15942 572 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 NFIL3Q16649 462 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CLEC16AQ2KHT3 1053 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SMU1Q2TAY7 513 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 HSF5Q4G112 596 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 EFHC1Q5JVL4 640 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 FAM209BQ5JX69 171 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CEP85Q6P2H3 762 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 FAM171BQ6P995 826 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 METAP1DQ6UB28 335 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 TAF8Q7Z7C8 310 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 MON1AQ86VX9 555 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SGMS1Q86VZ5 419 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 LSRQ86X29 649 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 STX12Q86Y82 276 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 TRIM59Q8IWR1 403 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 C10orf67Q8IYJ2 551 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 BBS5Q8N3I7 341 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 TCP11L2Q8N4U5 519 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF655Q8N720 491 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SLC16A11Q8NCK7 471 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 LINC00116Q8NCU8 138 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 TRPV1Q8NER1 839 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 OR9A1PQ8NGU1 263 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 KIF18AQ8NI77 898 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF461Q8TAF7 563 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SMARCC2Q8TAQ2 1214 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CHTF18Q8WVB6 975 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 AUTS2Q8WXX7 1259 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 STARD8Q92502 1023 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms