RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 ATP13A4Q4VNC1 1196 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 BOLA3Q53S33 107 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 JAMLQ86YT9 394 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 TTC16Q8NEE8 873 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 ATL2Q8NHH9 583 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 USP13Q92995 863 aaPredicted RBP19.24■□□□□ 0.67
CIRBP-202ENST00000413636 ARHGAP26Q9UNA1 814 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 TLR6Q9Y2C9 796 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 HBS1LQ9Y450 684 aaKnown RBP19.24■□□□□ 0.67
CIRBP-202ENST00000413636 LRRD1A4D1F6 860 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 TCF4P15884 667 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 SP100P23497 879 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-202ENST00000413636 COG7P83436 770 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 ZC3H12AQ5D1E8 599 aaKnown RBP19.23■□□□□ 0.67
CIRBP-202ENST00000413636 FAM78AQ5JUQ0 283 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 PTCRAQ6ISU1 281 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-202ENST00000413636 MFSD7Q6UXD7 560 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 RNF34Q969K3 372 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 HINFPQ9BQA5 517 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 FRMD8P1Q9BZ68 369 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-202ENST00000413636 FAM129AQ9BZQ8 928 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 DCLK3Q9C098 648 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 TDP1Q9NUW8 608 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 NFU1Q9UMS0 254 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 CCL26Q9Y258 94 aa19.23■□□□□ 0.67
CIRBP-202ENST00000413636 ZSCAN5CA6NGD5 496 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-202ENST00000413636 PRPSAP2O60256 369 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 ECEL1O95672 775 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 KDELR1P24390 212 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 CDKN2BP42772 138 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 CXCR3P49682 368 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 KCNQ1P51787 676 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 KPNA1P52294 538 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-202ENST00000413636 DUPD1Q68J44 220 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 SCYL2Q6P3W7 929 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 DRICH1Q6PGQ1 229 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-202ENST00000413636 SND1Q7KZF4 910 aaKnown RBP eCLIP19.22■□□□□ 0.67
CIRBP-202ENST00000413636 FAM131BQ86XD5 332 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 MAP7D3Q8IWC1 876 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 ADAMTS19Q8TE59 1207 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 RAPGEF5Q92565 580 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 SMARCD2Q92925 531 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 SLC39A13Q96H72 371 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 FCRL2Q96LA5 508 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-202ENST00000413636 ASB16Q96NS5 453 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 HEMGNQ9BXL5 484 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 ZWILCHQ9H900 591 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 hCG_1818297A0A087WSY0 165 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 ESYT3A0FGR9 886 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 SASH3O75995 380 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 STC2O76061 302 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 GAS8O95995 478 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 IGLV3-27P01718 113 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 LAMP2P13473 410 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 IL1R2P27930 398 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 WEE1P30291 646 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 HLTFQ14527 1009 aaKnown RBP eCLIP19.22■□□□□ 0.67
CIRBP-202ENST00000413636 SMAD2Q15796 467 aaKnown RBP19.22■□□□□ 0.67
CIRBP-202ENST00000413636 TAZQ16635 292 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 TTC27Q6P3X3 843 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 OTOP3Q7RTS5 596 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 VSIG1Q86XK7 387 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 KRT222Q8N1A0 295 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 TTC13Q8NBP0 860 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 KCTD6Q8NC69 237 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 ST13P5Q8NFI4 369 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-202ENST00000413636 SH3RF2Q8TEC5 729 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 TEKT4Q8WW24 435 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 C1orf54Q8WWF1 131 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 WBP2Q969T9 261 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 PLD4Q96BZ4 506 aa19.22■□□□□ 0.67
CIRBP-202ENST00000413636 ZFP37Q9Y6Q3 630 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-202ENST00000413636 PI4K2BG5E9Z4 385 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 LEFTY2O00292 366 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 CCR1P32246 355 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 VIPR2P41587 438 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 RING1Q06587 406 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 PDK2Q15119 407 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 TXNRD3NBQ6F5E7 133 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 PHF7Q9BWX1 381 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-202ENST00000413636 WDCPQ9H6R7 721 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 CFAP97Q9P2B7 532 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 PCSK1NQ9UHG2 260 aa19.21■□□□□ 0.67
CIRBP-202ENST00000413636 C3orf70A6NLC5 250 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-202ENST00000413636 DAPK3O43293 454 aa19.2■□□□□ 0.66
CIRBP-202ENST00000413636 MOCS2O96007 188 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-202ENST00000413636 PPP2R5DQ14738 602 aa19.2■□□□□ 0.66
CIRBP-202ENST00000413636 PPP1R7Q15435 360 aa19.2■□□□□ 0.66
CIRBP-202ENST00000413636 PUS10Q3MIT2 529 aaKnown RBP19.2■□□□□ 0.66
CIRBP-202ENST00000413636 DDX42Q86XP3 938 aaKnown RBP eCLIP19.2■□□□□ 0.662e-6■■■□□ 17.9
CIRBP-202ENST00000413636 GSPT2Q8IYD1 628 aaKnown RBP19.2■□□□□ 0.66
CIRBP-202ENST00000413636 MREGQ8N565 214 aa19.2■□□□□ 0.66
CIRBP-202ENST00000413636 CELF5Q8N6W0 485 aaKnown RBP19.2■□□□□ 0.66
CIRBP-202ENST00000413636 RIN3Q8TB24 985 aa19.2■□□□□ 0.66
CIRBP-202ENST00000413636 ACSF2Q96CM8 615 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-202ENST00000413636 RSPRY1Q96DX4 576 aa19.2■□□□□ 0.66
CIRBP-202ENST00000413636 HERPUD2Q9BSE4 406 aa19.2■□□□□ 0.66
CIRBP-202ENST00000413636 TKTL2Q9H0I9 626 aa19.2■□□□□ 0.66
CIRBP-202ENST00000413636 ANLNQ9NQW6 1124 aa19.2■□□□□ 0.66
CIRBP-202ENST00000413636 TMPRSS4Q9NRS4 437 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms