RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 EPHB2P29323 1055 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 SSTR1P30872 391 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 HOXC13P31276 330 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 CD68P34810 354 aaPredicted RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 GLUD2P49448 558 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 KCNQ1P51787 676 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 EIF3BP55884 814 aaKnown RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 TBX4P57082 545 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 BASP1P80723 227 aaKnown RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 HTRA4P83105 476 aaPredicted RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 SMARCB1Q12824 385 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 RAB33AQ14088 237 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 PPP2R5DQ14738 602 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 ARL13BQ3SXY8 428 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 KRT71Q3SY84 523 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 DNAJC21Q5F1R6 531 aaKnown RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 BRMS1LQ5PSV4 323 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 AFMIDQ63HM1 303 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 TTC19Q6DKK2 380 aaPredicted RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 NADSYN1Q6IA69 706 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 PCGF5Q86SE9 256 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 HOOK3Q86VS8 718 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 CMTR2Q8IYT2 770 aaKnown RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 ZNF567Q8N184 647 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 TMEM199Q8N511 208 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 CNTD1Q8N815 330 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 ZNF461Q8TAF7 563 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 C2orf15Q8WU43 125 aaKnown RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 IGSF8Q969P0 613 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 FBXO32Q969P5 355 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 PGM2Q96G03 612 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 CELF6Q96J87 481 aaKnown RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 C1orf74Q96LT6 269 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 PRMT1Q99873 361 aaKnown RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 CENPHQ9H3R5 247 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 GOLGA6AQ9NYA3 693 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 EURLQ9NYK6 297 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 CLIC5Q9NZA1 410 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 MPP6Q9NZW5 540 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 PAK5Q9P286 719 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 BCCIPQ9P287 314 aaKnown RBP eCLIP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 CTNNAL1Q9UBT7 734 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 RABGEF1Q9UJ41 708 aa8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 MAGED2Q9UNF1 606 aaPredicted RBP8.89□□□□□ -0.99
HMGN1P34-201ENST00000413023 TANC1Q9C0D5 1861 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 A0A0A0MRY4 1105 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 DRGXA6NNA5 263 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 HMGB1P1B2RPK0 211 aaPredicted RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 KCNK1O00180 336 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 RNF103O00237 685 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 NRG2O14511 850 aaPredicted RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 CHADO15335 359 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 ZBTB24O43167 697 aaPredicted RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 CNTN5O94779 1100 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 RTN3O95197 1032 aaPredicted RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 IGLV3-27P01718 113 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 FGBP02675 491 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 KLKB1P03952 638 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 HMBSP08397 361 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 SPATA31D3P0C874 917 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 PTPN3P26045 913 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 CCR1P32246 355 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 ELK3P41970 407 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 MAGEA3P43357 314 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 TUBP50607 506 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 ATP1A2P50993 1020 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 MAGOHP61326 146 aaKnown RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 RPL10AP62906 217 aaKnown RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 SKOR1P84550 965 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 PPIDQ08752 370 aaKnown RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 GALNT2Q10471 571 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 AP1B1Q10567 949 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 ZBTB17Q13105 803 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 OLIG2Q13516 323 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 MPP2Q14168 576 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 SPARCL1Q14515 664 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 PDK1Q15118 436 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 TRIP4Q15650 581 aaPredicted RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 BBS9Q3SYG4 887 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 CCDC38Q502W7 563 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 MS4A13Q5J8X5 152 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 C10orf120Q5SQS8 335 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 TMEM240Q5SV17 173 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 SPOUT1Q5T280 376 aaKnown RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 C6orf118Q5T5N4 469 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 SPATA31D4Q6ZUB0 917 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 SPRED2Q7Z698 418 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 TMEM150AQ86TG1 271 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 PRPF39Q86UA1 669 aaKnown RBP8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 EXOC3L1Q86VI1 746 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 NLRP14Q86W24 1093 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 ZBED8Q8IZ13 594 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 VPS52Q8N1B4 723 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 MPP5Q8N3R9 675 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 MCUQ8NE86 351 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 FBXO36Q8NEA4 188 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 FAM76AQ8TAV0 307 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 MDM1Q8TC05 714 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 MAML1Q92585 1016 aa8.88□□□□□ -0.99
HMGN1P34-201ENST00000413023 EXOC4Q96A65 974 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms