RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 KCND2Q9NZV8 630 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 CRYL1Q9Y2S2 319 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PCDHGA3Q9Y5H0 932 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 GRXCR2A6NFK2 248 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 TRIM64A6NGJ6 449 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 SCGNO76038 276 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 RTN3O95197 1032 aaPredicted RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PLEKP08567 350 aaPredicted RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 ITIH2P19823 946 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 COPAP53621 1224 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 CBWD1Q9BRT8 395 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 CERS4Q9HA82 394 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 GPAMQ9HCL2 828 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 RFX7Q2KHR2 1363 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 B2RBV5 119 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 O00370 1275 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 VEGFAP15692 232 aaPredicted RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 ALAS2P22557 587 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 RPL9P32969 192 aaKnown RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PLA2G4EQ3MJ16 856 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF621Q6ZSS3 439 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 TMEM26Q6ZUK4 368 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 SGMS1Q86VZ5 419 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 ZSWIM2Q8NEG5 633 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 CCDC88AQ3V6T2 1871 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 CENPXA8MT69 81 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 RAMP2O60895 175 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 CYP2F1P24903 491 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 STXBP1P61764 594 aaKnown RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 STX5Q13190 355 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 ACAP2Q15057 778 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 TMED8Q6PL24 325 aaPredicted RBP11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 MFSD7Q6UXD7 560 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PRR23BQ6ZRT6 265 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 UBASH3BQ8TF42 649 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 REPS1Q96D71 796 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 PLA2G12BQ9BX93 195 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 MRGBPQ9NV56 204 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 TAF6LQ9Y6J9 622 aa11.47□□□□□ -0.57
PRPF40A-202ENST00000410080 TRIM24O15164 1050 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 IGFALSP35858 605 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 RENBPP51606 427 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 PLPP4Q5VZY2 271 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 FAM131BQ86XD5 332 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 PPP1R13LQ8WUF5 828 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 ELMO1Q92556 727 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 PROX1Q92786 737 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 FAM111AQ96PZ2 611 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 PXMP2Q9NR77 195 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 MRPS23Q9Y3D9 190 aaKnown RBP11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 H3BMM5 538 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SLC37A4O43826 429 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SEC22BO75396 215 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 GNRH1P01148 92 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 ADORA2AP29274 412 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 TUBP50607 506 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 BNC1Q01954 994 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SLC15A2Q16348 729 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SEL1L3Q68CR1 1132 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 MPZL3Q6UWV2 235 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 VPS33AQ96AX1 596 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 NYAP2Q9P242 653 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 POLLQ9UGP5 575 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 TFR2Q9UP52 801 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SDR42E2A6NKP2 422 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 CES2O00748 559 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 MT-CO1P00395 513 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 ICAM1P05362 532 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 IFNGR2P38484 337 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 LAMTOR4Q0VGL1 99 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 MFSD10Q14728 455 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SLC18A3Q16572 532 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 DAW1Q8N136 415 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SPATA4Q8NEY3 305 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SEPHS2Q99611 448 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 C7orf25Q9BPX7 421 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 RUSC1Q9BVN2 902 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 TRDMT1O14717 391 aaKnown RBP11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 ACAT1P24752 427 aaKnown RBP11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 PDX1P52945 283 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 FSCN1Q16658 493 aaKnown RBP11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 COL23A1Q86Y22 540 aaPredicted RBP11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 STX12Q86Y82 276 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 KIF2BQ8N4N8 673 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 PIGKQ92643 395 aa11.46□□□□□ -0.57
PRPF40A-202ENST00000410080 SNPHO15079 494 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 FOXP2O15409 715 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF862O60290 1169 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 BACE1P56817 501 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 BEX3Q00994 111 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 ACAD10Q6JQN1 1059 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 LRRC49Q8IUZ0 686 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 ELMO3Q96BJ8 720 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 C6orf62Q9GZU0 229 aaPredicted RBP11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 A0A0A6YYK5 440 aaPredicted RBP11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 ZBTB14O43829 449 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF697Q5TEC3 545 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 SLC30A9Q6PML9 568 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms