RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 IQSEC1Q6DN90 963 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 ATG14Q6ZNE5 492 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 USP50Q70EL3 339 aaPredicted RBP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 DPP9Q86TI2 863 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 ZNF567Q8N184 647 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 SLC10A4Q96EP9 437 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 ZNF560Q96MR9 790 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 TINF2Q9BSI4 451 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 H3BRJ5 948 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 PLIN3O60664 434 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 DAB1O75553 588 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 SMNDC1O75940 238 aaKnown RBP eCLIP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 LUC7L3O95232 432 aaKnown RBP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 ATP5BP06576 529 aaKnown RBP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 SERPINA6P08185 405 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 NOS2P35228 1153 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 DPYSQ14117 519 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 PAFAH1B3Q15102 231 aaKnown RBP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 N4BP2L1Q5TBK1 243 aaPredicted RBP16.33■□□□□ 0.2
HOXD3-202ENST00000410016 GPR142Q7Z601 462 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 CDKL2Q92772 493 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 TNIP3Q96KP6 325 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 DONSONQ9NYP3 566 aa16.33■□□□□ 0.2
HOXD3-202ENST00000410016 SF3B1O75533 1304 aaKnown RBP eCLIP16.32■□□□□ 0.2
HOXD3-202ENST00000410016 BTBD19C9JJ37 291 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 CLDN5O00501 218 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 PSMG1O95456 288 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 F2P00734 622 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 ITGA2BP08514 1039 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 AXLP30530 894 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 ADAM17P78536 824 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 TUBB3Q13509 450 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 GRB14Q14449 540 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 PDK1Q15118 436 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 ANO7Q6IWH7 933 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 RNF169Q8NCN4 708 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 ARRDC4Q8NCT1 418 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 FAM167BQ9BTA0 163 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 NAT9Q9BTE0 207 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 SYBUQ9NX95 663 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 TAGLN3Q9UI15 199 aa16.32■□□□□ 0.2
HOXD3-202ENST00000410016 PIN4Q9Y237 131 aaKnown RBP16.32■□□□□ 0.2
HOXD3-202ENST00000410016 PRR5-ARHGAP8B1AHC4 643 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 GLRA3O75311 464 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 CAPN15O75808 1086 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 CYP2C9P11712 490 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 ACADSP16219 412 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 RPL10AP62906 217 aaKnown RBP16.31■□□□□ 0.2
HOXD3-202ENST00000410016 ARHGAP8P85298 464 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 SNX17Q15036 470 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 MDH1BQ5I0G3 518 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 SNX30Q5VWJ9 437 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 TRIM68Q6AZZ1 485 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 PIWIL2Q8TC59 973 aaKnown RBP16.31■□□□□ 0.2
HOXD3-202ENST00000410016 DNAJB3Q8WWF6 145 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 DNAJC9Q8WXX5 260 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 ZNF333Q96JL9 665 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 NMRK1Q9NWW6 199 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 IL1RAPL1Q9NZN1 696 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 IGSF9Q9P2J2 1179 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 STX18Q9P2W9 335 aaKnown RBP16.31■□□□□ 0.2
HOXD3-202ENST00000410016 DCDC2Q9UHG0 476 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 SUFUQ9UMX1 484 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 M0QYT0 321 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 CAPN9O14815 690 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 DCLK1O15075 740 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 CREB3O43889 395 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 HUS1O60921 280 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 LYPLA1O75608 230 aaPredicted RBP16.31■□□□□ 0.2
HOXD3-202ENST00000410016 STK10O94804 968 aaKnown RBP16.31■□□□□ 0.2
HOXD3-202ENST00000410016 FYNP06241 537 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 NPR3P17342 541 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 KCNA4P22459 653 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 WARSP23381 471 aaKnown RBP16.31■□□□□ 0.2
HOXD3-202ENST00000410016 IGFBP6P24592 240 aaPredicted RBP16.31■□□□□ 0.2
HOXD3-202ENST00000410016 ALDH18A1P54886 795 aaKnown RBP16.31■□□□□ 0.2
HOXD3-202ENST00000410016 KDSRQ06136 332 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 SLC34A1Q06495 639 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 NAB1Q13506 487 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 PCLAFQ15004 111 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 SV2CQ496J9 727 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 PPM1JQ5JR12 505 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 HFE2Q6ZVN8 426 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 CCNYQ8ND76 341 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 KCTD13Q8WZ19 329 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 SLC2A13Q96QE2 648 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 GORASP1Q9BQQ3 440 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 PIGVQ9NUD9 493 aa16.31■□□□□ 0.2
HOXD3-202ENST00000410016 SYNJ2BP-COX16A0A087WUM0 186 aa16.3■□□□□ 0.2
HOXD3-202ENST00000410016 FAM72CH0Y354 149 aa16.3■□□□□ 0.2
HOXD3-202ENST00000410016 I6L893 689 aaPredicted RBP16.3■□□□□ 0.2
HOXD3-202ENST00000410016 DYNC1LI2O43237 492 aaPredicted RBP16.3■□□□□ 0.2
HOXD3-202ENST00000410016 ERVK-10P10266 1014 aa16.3■□□□□ 0.2
HOXD3-202ENST00000410016 ARRB2P32121 409 aa16.3■□□□□ 0.2
HOXD3-202ENST00000410016 VHLP40337 213 aa16.3■□□□□ 0.2
HOXD3-202ENST00000410016 SESN3P58005 492 aa16.3■□□□□ 0.2
HOXD3-202ENST00000410016 OLIG2Q13516 323 aa16.3■□□□□ 0.2
HOXD3-202ENST00000410016 FAM72AQ5TYM5 149 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms