RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ADH5P11766 374 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 TNNT1P13805 278 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 L1CAMP32004 1257 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 KCNT1Q5JUK3 1230 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 ZFYVE27Q5T4F4 411 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 TTC39BQ5VTQ0 682 aaPredicted RBP21.31■■□□□ 1
C4orf48-202ENST00000409860 FBXL22Q6P050 247 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 RHBDF2Q6PJF5 856 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 TMEM25Q86YD3 366 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 DDI1Q8WTU0 396 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 PRICKLE1Q96MT3 831 aaPredicted RBP21.31■■□□□ 1
C4orf48-202ENST00000409860 RPRD1AQ96P16 312 aaPredicted RBP21.31■■□□□ 1
C4orf48-202ENST00000409860 BBS2Q9BXC9 721 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.31■■□□□ 1
C4orf48-202ENST00000409860 GTSE1Q9NYZ3 720 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 C5orf42Q9H799 3197 aa21.31■■□□□ 1
C4orf48-202ENST00000409860 E9PAM4 449 aa21.3■■□□□ 1
C4orf48-202ENST00000409860 HOXC11O43248 304 aaPredicted RBP21.3■■□□□ 1
C4orf48-202ENST00000409860 ZNF135P52742 658 aaPredicted RBP21.3■■□□□ 1
C4orf48-202ENST00000409860 KRT81Q14533 505 aa21.3■■□□□ 1
C4orf48-202ENST00000409860 TXNRD3NBQ6F5E7 133 aa21.3■■□□□ 1
C4orf48-202ENST00000409860 PEX26Q7Z412 305 aa21.3■■□□□ 1
C4orf48-202ENST00000409860 C14orf80Q86SX3 495 aa21.3■■□□□ 1
C4orf48-202ENST00000409860 UBALD2Q8IYN6 164 aa21.3■■□□□ 1
C4orf48-202ENST00000409860 TRIM58Q8NG06 486 aa21.3■■□□□ 1
C4orf48-202ENST00000409860 TTC8Q8TAM2 541 aa21.3■■□□□ 1
C4orf48-202ENST00000409860 AMFRQ9UKV5 643 aa21.3■■□□□ 1
C4orf48-202ENST00000409860 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.3■■□□□ 1
C4orf48-202ENST00000409860 TCF20Q9UGU0 1960 aaKnown RBP21.29■■□□□ 1
C4orf48-202ENST00000409860 KIF26AQ9ULI4 1882 aaPredicted RBP21.29■■□□□ 1
C4orf48-202ENST00000409860 NEDD8-MDP1E9PL57 170 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 CREB3O43889 395 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 TBL1XO60907 577 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 SRGAP2O75044 1071 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 PENKP01210 267 aaPredicted RBP21.29■■□□□ 1
C4orf48-202ENST00000409860 HTR7P34969 479 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 AMPD2Q01433 879 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 DPYSL2Q16555 572 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 CA9Q16790 459 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 PPP6R3Q5H9R7 873 aaPredicted RBP21.29■■□□□ 1
C4orf48-202ENST00000409860 MPP7Q5T2T1 576 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 PYROXD2Q8N2H3 581 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 BHMTQ93088 406 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 TBC1D31Q96DN5 1066 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 KCTD15Q96SI1 283 aaPredicted RBP21.29■■□□□ 1
C4orf48-202ENST00000409860 CD320Q9NPF0 282 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 DDX56Q9NY93 547 aaKnown RBP21.29■■□□□ 1
C4orf48-202ENST00000409860 PPARGC1AQ9UBK2 798 aaKnown RBP21.29■■□□□ 1
C4orf48-202ENST00000409860 MUTYHQ9UIF7 546 aa21.29■■□□□ 1
C4orf48-202ENST00000409860 OTOL1A6NHN0 477 aaPredicted RBP21.28■■□□□ 1
C4orf48-202ENST00000409860 USP27XA6NNY8 438 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 LRIG2O94898 1065 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 FTCDO95954 541 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 TYRP14679 529 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 SGSHP51688 502 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 TPI1P60174 286 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 RPS24P62847 133 aaKnown RBP21.28■■□□□ 1
C4orf48-202ENST00000409860 C5orf22Q49AR2 442 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 ODF2Q5BJF6 829 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 MANEALQ5VSG8 457 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 FYB2Q5VWT5 728 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 RWDD4Q6NW29 188 aaKnown RBP21.28■■□□□ 1
C4orf48-202ENST00000409860 NT5DC3Q86UY8 548 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 CCDC117Q8IWD4 279 aaPredicted RBP21.28■■□□□ 1
C4orf48-202ENST00000409860 ZNF683Q8IZ20 524 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 KCTD6Q8NC69 237 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 UBE2Q2Q8WVN8 375 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 IGSF8Q969P0 613 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 MYEOVQ96EZ4 313 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 XPO6Q96QU8 1125 aaKnown RBP21.28■■□□□ 1
C4orf48-202ENST00000409860 MAGEB5Q9BZ81 275 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 C8orf33Q9H7E9 229 aaPredicted RBP21.28■■□□□ 1
C4orf48-202ENST00000409860 KCND1Q9NSA2 647 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 STIM2Q9P246 746 aa21.28■■□□□ 1
C4orf48-202ENST00000409860 IGLV3-10A0A075B6K4 115 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 DRGXA6NNA5 263 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 MIF4GDA9UHW6 222 aaKnown RBP21.27■■□□□ 1
C4orf48-202ENST00000409860 FAM72CH0Y354 149 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 H3BRJ5 948 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 EEF2KO00418 725 aaKnown RBP21.27■■□□□ 1
C4orf48-202ENST00000409860 KIF5CO60282 957 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 KRT1P04264 644 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 MSNP26038 577 aaKnown RBP21.27■■□□□ 1
C4orf48-202ENST00000409860 CTNNA2P26232 953 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 GJA4P35212 333 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 CTNNA1P35221 906 aaKnown RBP21.27■■□□□ 1
C4orf48-202ENST00000409860 ARL4AP40617 200 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 CDH6P55285 790 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 SEMA3BQ13214 749 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 PDK2Q15119 407 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 FAM72AQ5TYM5 149 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 FAM72DQ6L9T8 149 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 FAM72BQ86X60 149 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 MAP7D3Q8IWC1 876 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 CFAP52Q8N1V2 620 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 ZNF557Q8N988 423 aaPredicted RBP21.27■■□□□ 1
C4orf48-202ENST00000409860 CD101Q93033 1021 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 MSANTD3Q96H12 275 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 ZYG11BQ9C0D3 744 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 PCDH18Q9HCL0 1135 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms