RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SPEM1Q8N4L4 309 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 HJURPQ8NCD3 748 aaPredicted RBP23.15■■□□□ 1.3
PTCD3-203ENST00000409783 WFDC5Q8TCV5 224 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 USP33Q8TEY7 942 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 FAM172AQ8WUF8 416 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 TRIM7Q9C029 511 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 THAP2Q9H0W7 228 aa23.15■■□□□ 1.3
PTCD3-203ENST00000409783 WDFY4Q6ZS81 3184 aa23.14■■□□□ 1.3
PTCD3-203ENST00000409783 CHURC1-FNTBB4DL54 471 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 PRRT4C9JH25 899 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 ZNF252P-AS1Q0IIN9 211 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 TCF15Q12870 199 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 AUHQ13825 339 aaKnown RBP23.14■■□□□ 1.29
PTCD3-203ENST00000409783 C5orf22Q49AR2 442 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 PREPLQ4J6C6 727 aaPredicted RBP23.14■■□□□ 1.29
PTCD3-203ENST00000409783 EMC10Q5UCC4 262 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 FBXL22Q6P050 247 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 DCUN1D2Q6PH85 259 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 C14orf80Q86SX3 495 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 ZNF683Q8IZ20 524 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 CFAP52Q8N1V2 620 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 LMLNQ96KR4 655 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 CNPY3Q9BT09 278 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 KCNH6Q9H252 994 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 NHEJ1Q9H9Q4 299 aaPredicted RBP23.14■■□□□ 1.29
PTCD3-203ENST00000409783 SPATA6Q9NWH7 488 aaPredicted RBP23.14■■□□□ 1.29
PTCD3-203ENST00000409783 RAPGEFL1Q9UHV5 662 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 PAXBP1Q9Y5B6 917 aa23.14■■□□□ 1.29
PTCD3-203ENST00000409783 MUC6Q6W4X9 2439 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 DOCK4Q8N1I0 1966 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 TBC1D3BA6NDS4 549 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 CDC25BP30305 580 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 GGCXP38435 758 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 GALCP54803 685 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 GEN1Q17RS7 908 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 KIAA0907Q7Z7F0 614 aaPredicted RBP23.13■■□□□ 1.29
PTCD3-203ENST00000409783 IGSF8Q969P0 613 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 C1orf74Q96LT6 269 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 PRMT8Q9NR22 394 aaPredicted RBP23.13■■□□□ 1.29
PTCD3-203ENST00000409783 MYO1AQ9UBC5 1043 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 STARD13Q9Y3M8 1113 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 SNX10Q9Y5X0 201 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 SCINQ9Y6U3 715 aa23.13■■□□□ 1.29
PTCD3-203ENST00000409783 ANKRD62A6NC57 917 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 F5H5T6 163 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 CYP1A2P05177 515 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 COL9A1P20849 921 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 HLA-FP30511 346 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 IRAK1P51617 712 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 SEC13P55735 322 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 ANGPT1Q15389 498 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 C10orf76Q5T2E6 689 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 ARFGAP1Q8N6T3 406 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.12■■□□□ 1.29
PTCD3-203ENST00000409783 RPLP0P6Q8NHW5 317 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 FNIP1Q8TF40 1166 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 ARHGEF26Q96DR7 871 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 HAPLN3Q96S86 360 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 PRRX2Q99811 253 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 SIK2Q9H0K1 926 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 STIM2Q9P246 746 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 CACNA1HO95180 2353 aa23.12■■□□□ 1.29
PTCD3-203ENST00000409783 TDGF1P13385 188 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 FECHP22830 423 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 ADRA1BP35368 520 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 MRPS21P82921 87 aaKnown RBP23.11■■□□□ 1.29
PTCD3-203ENST00000409783 SATB1Q01826 763 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 C2orf27AQ580R0 203 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 TMEM215Q68D42 235 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 CCDC185Q8N715 623 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 FIBINQ8TAL6 211 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 PACSIN1Q9BY11 444 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 MRPL47Q9HD33 250 aaKnown RBP23.11■■□□□ 1.29
PTCD3-203ENST00000409783 SPTLC3Q9NUV7 552 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 POLR3BQ9NW08 1133 aaPredicted RBP23.11■■□□□ 1.29
PTCD3-203ENST00000409783 VANGL2Q9ULK5 521 aa23.11■■□□□ 1.29
PTCD3-203ENST00000409783 AKR1B10O60218 316 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 LUC7L3O95232 432 aaKnown RBP23.1■■□□□ 1.29
PTCD3-203ENST00000409783 PAPSS2O95340 614 aaPredicted RBP23.1■■□□□ 1.29
PTCD3-203ENST00000409783 FSCBQ5H9T9 825 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 ANKS1BQ7Z6G8 1248 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 CIR1Q86X95 450 aaPredicted RBP23.1■■□□□ 1.29
PTCD3-203ENST00000409783 IL17RCQ8NAC3 791 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 CCDC26Q8TAB7 109 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 NTAN1Q96AB6 310 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 CCDC42Q96M95 316 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 PANX2Q96RD6 677 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 MAGEB5Q9BZ81 275 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 DEF6Q9H4E7 631 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 HCN4Q9Y3Q4 1203 aa23.1■■□□□ 1.29
PTCD3-203ENST00000409783 IGLV3-10A0A075B6K4 115 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 DRGXA6NNA5 263 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 LAMTOR5O43504 91 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 ATG13O75143 517 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 PSMA2P25787 234 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 HOXC13P31276 330 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 CD70P32970 193 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 TIE1P35590 1138 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 CXCL12P48061 93 aa23.09■■□□□ 1.29
PTCD3-203ENST00000409783 CCR3P51677 355 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms