RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 TMEM63AO94886 807 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 ERCC2P18074 760 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 NR1D1P20393 614 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 MAGEA6P43360 314 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 ARPP19P56211 112 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 CBLBQ13191 982 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 CAMK1Q14012 370 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 ADGRE1Q14246 886 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 KCNJ11Q14654 390 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 PDK1Q15118 436 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 SDHAF4Q5VUM1 108 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 HEATR6Q6AI08 1181 aaKnown RBP14.53□□□□□ -0.08
LIMS2-206ENST00000409754 RSPO2Q6UXX9 243 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-206ENST00000409754 PPP1R21Q6ZMI0 780 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 TAS1R1Q7RTX1 841 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 RNF168Q8IYW5 571 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-206ENST00000409754 COLGALT1Q8NBJ5 622 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 GDPD5Q8WTR4 605 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 RNF34Q969K3 372 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 SPATA17Q96L03 361 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 C9orf72Q96LT7 481 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 HAPLN3Q96S86 360 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 FRMD8Q9BZ67 464 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-206ENST00000409754 NMUR1Q9HB89 426 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 BCCIPQ9P287 314 aaKnown RBP eCLIP14.53□□□□□ -0.08
LIMS2-206ENST00000409754 XPO7Q9UIA9 1087 aaKnown RBP14.53□□□□□ -0.08
LIMS2-206ENST00000409754 SPTBN5Q9NRC6 3674 aaKnown RBP14.53□□□□□ -0.08
LIMS2-206ENST00000409754 PLXNA3P51805 1871 aa14.53□□□□□ -0.08
LIMS2-206ENST00000409754 TMEM265A0A087WTH1 108 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 TCRBV7S3A2A0A539 114 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 A6NNZ2 444 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 PPP1R12AO14974 1030 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 RTN3O95197 1032 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 HAPLN1P10915 354 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 DNAJB1P25685 340 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 GLUD2P49448 558 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 PGFP49763 221 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 PDIA2Q13087 525 aaKnown RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 PPP2R5DQ14738 602 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 PRKD1Q15139 912 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 USP41Q3LFD5 358 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 TUBB8Q3ZCM7 444 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 GPR153Q6NV75 609 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 MSANTD2Q6P1R3 559 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 RNF19BQ6ZMZ0 732 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 ARFGAP2Q8N6H7 521 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 TTC9BQ8N6N2 239 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 EPS8L3Q8TE67 593 aaKnown RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 HTR3CQ8WXA8 447 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 ARNTL2Q8WYA1 636 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 CASP10Q92851 521 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 IGSF21Q96ID5 467 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 SERPINB11Q96P15 392 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 SERPINB12Q96P63 405 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 TGS1Q96RS0 853 aaKnown RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 KLC2Q9H0B6 622 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 STMN4Q9H169 189 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 RAB6BQ9NRW1 208 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 MTRRQ9UBK8 725 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 OR12D3Q9UGF7 316 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 NOVA2Q9UNW9 492 aaKnown RBP14.52□□□□□ -0.08
LIMS2-206ENST00000409754 BACE2Q9Y5Z0 518 aa14.52□□□□□ -0.08
LIMS2-206ENST00000409754 TLDC2A0PJX2 215 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 GOLGA8MH3BSY2 632 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 RGS16O15492 202 aaPredicted RBP14.52□□□□□ -0.09
LIMS2-206ENST00000409754 VNN2O95498 520 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 AGTP01019 485 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 IVLP07476 585 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 VAV1P15498 845 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 YWHAQP27348 245 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 CCR1P32246 355 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 HTR7P34969 479 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 BMPR1AP36894 532 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 LMAN1P49257 510 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 USP46P62068 366 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 RPL10AP62906 217 aaKnown RBP14.52□□□□□ -0.09
LIMS2-206ENST00000409754 STAT4Q14765 748 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 TNFAIP8L3Q5GJ75 292 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 SLC8B1Q6J4K2 584 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 DENND5BQ6ZUT9 1274 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 ZBED8Q8IZ13 594 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 PDIK1LQ8N165 341 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 SLC39A11Q8N1S5 342 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 TAB3Q8N5C8 712 aaPredicted RBP14.52□□□□□ -0.09
LIMS2-206ENST00000409754 CCDC110Q8TBZ0 833 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 FERMT1Q9BQL6 677 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 CCDC77Q9BR77 488 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 BRD8Q9H0E9 1235 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 PRDM12Q9H4Q4 367 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 OSER1Q9NX31 292 aa14.52□□□□□ -0.09
LIMS2-206ENST00000409754 A0A087WUV0 522 aaPredicted RBP14.51□□□□□ -0.09
LIMS2-206ENST00000409754 A0A0A0MRY4 1105 aa14.51□□□□□ -0.09
LIMS2-206ENST00000409754 GRM6O15303 877 aa14.51□□□□□ -0.09
LIMS2-206ENST00000409754 NCAM2O15394 837 aa14.51□□□□□ -0.09
LIMS2-206ENST00000409754 SHOX2O60902 331 aaPredicted RBP14.51□□□□□ -0.09
LIMS2-206ENST00000409754 LRIG2O94898 1065 aa14.51□□□□□ -0.09
LIMS2-206ENST00000409754 CTNNB1P35222 781 aa14.51□□□□□ -0.09
LIMS2-206ENST00000409754 PSEN1P49768 467 aa14.51□□□□□ -0.09
LIMS2-206ENST00000409754 MAGOHP61326 146 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms