RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TRMOQ9BU70 441 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 TUBB6Q9BUF5 446 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 CRB3Q9BUF7 120 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 WDR12Q9GZL7 423 aaKnown RBP4.66□□□□□ -1.66
PMS1-203ENST00000409593 ZNF700Q9H0M5 742 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 TP63Q9H3D4 680 aaPredicted RBP4.66□□□□□ -1.66
PMS1-203ENST00000409593 PAPOLBQ9NRJ5 636 aaKnown RBP4.66□□□□□ -1.66
PMS1-203ENST00000409593 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.66□□□□□ -1.66
PMS1-203ENST00000409593 HS3ST3B1Q9Y662 390 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 LY6G6EA0A0G2JKS1 128 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 ABHD14A-ACY1A0A1B0GW23 586 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 PPP6R2O75170 966 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 RFPL3SP0C7P2 107 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 GYS1P13807 737 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 ME1P48163 572 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 SHC2P98077 582 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 SF3A3Q12874 501 aaKnown RBP eCLIP4.65□□□□□ -1.664e-6■■■■□ 22.2
PMS1-203ENST00000409593 UBE4AQ14139 1066 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 ZNF569Q5MCW4 686 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 IRF2BP2Q7Z5L9 587 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 PIP4P1Q86T03 277 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 ARFGAP1Q8N6T3 406 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 ARL14EPQ8N8R7 260 aaPredicted RBP4.65□□□□□ -1.66
PMS1-203ENST00000409593 ATG16L2Q8NAA4 619 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 ADPRHL1Q8NDY3 354 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 BCAS4Q8TDM0 211 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 HMGB4Q8WW32 186 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 ZFYVE19Q96K21 471 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 MECRQ9BV79 373 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 ERVK-5Q9HDB9 667 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.65□□□□□ -1.66
PMS1-203ENST00000409593 LRFN1Q9P244 771 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 SLC12A4Q9UP95 1085 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 DAAM1Q9Y4D1 1078 aa4.65□□□□□ -1.66
PMS1-203ENST00000409593 TTBK1Q5TCY1 1321 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3DA0A087WVF3 549 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3IA0A087WXS9 549 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3EA0A087X179 549 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3KA0A087X1G2 549 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3BA6NDS4 549 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3FA6NER0 549 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 C3orf70A6NLC5 250 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3LB9A6J9 549 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TRIM38O00635 465 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3HP0C7X1 549 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TGM2P21980 687 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 SCP2P22307 547 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 FAM3BP58499 235 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 KRTAP10-11P60412 298 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 RPL15P61313 204 aaKnown RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 PGM5Q15124 567 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 PUM3Q15397 648 aaKnown RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 PFKFB4Q16877 469 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3GQ6DHY5 549 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3CQ6IPX1 549 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 ZNF474Q6S9Z5 364 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 TECPR1Q7Z6L1 1165 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TBC1D3Q8IZP1 549 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 FAM47BQ8NA70 645 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 HTATIP2Q9BUP3 242 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 OSBPL5Q9H0X9 879 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 AAMDCQ9H7C9 122 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 POT1Q9NUX5 634 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 COG5Q9UP83 839 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 DPPA5A6NC42 116 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 F5H423 210 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 H3BNX3 289 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 ITGA2BP08514 1039 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 ALDOCP09972 364 aaKnown RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 PDIA3P30101 505 aaKnown RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 HTR3AP46098 478 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 B4GALNT1Q00973 533 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TLE3Q04726 772 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 ICA1Q05084 483 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 PTK2BQ14289 1009 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 ZACNQ401N2 412 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 ATPAF1Q5TC12 328 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 AWAT2Q6E213 333 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 LRIG3Q6UXM1 1119 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 COLCA1Q6ZS62 124 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 MYLK4Q86YV6 388 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 ADGRF3Q8IZF5 1079 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 Q8N9P0 234 aaPredicted RBP4.64□□□□□ -1.67
PMS1-203ENST00000409593 ZNF347Q96SE7 839 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 PIMREGQ9BSJ6 248 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 KATNAL1Q9BW62 490 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 TMEM120AQ9BXJ8 343 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 BRD8Q9H0E9 1235 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 PLCB1Q9NQ66 1216 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 CNTN6Q9UQ52 1028 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 ZBTB1Q9Y2K1 713 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 SQORQ9Y6N5 450 aa4.64□□□□□ -1.67
PMS1-203ENST00000409593 MYMKA6NI61 221 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 NFATC1O95644 943 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 PSG1P11464 419 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 CIITAP33076 1130 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 POLGP54098 1239 aaPredicted RBP4.63□□□□□ -1.67
PMS1-203ENST00000409593 SRSF1Q07955 248 aaKnown RBP eCLIP4.63□□□□□ -1.67
PMS1-203ENST00000409593 MIDNQ504T8 468 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 KLHL17Q6TDP4 642 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms