RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PCDHAC1Q9H158 963 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 KCNK13Q9HB14 408 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 GMPR2Q9P2T1 348 aaKnown RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 SOX13Q9UN79 622 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 PLLPQ9Y342 182 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 COL14A1Q05707 1796 aaKnown RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 LAMB2P55268 1798 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 TM9SF1O15321 606 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 CPA3P15088 417 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 SLC10A2Q12908 348 aaPredicted RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 RBM44Q6ZP01 1051 aaKnown RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 TDRD5Q8NAT2 981 aaKnown RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 ACVR1CQ8NER5 493 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 BHLHE22Q8NFJ8 381 aaPredicted RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 KCTD4Q8WVF5 259 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 CNPY3Q9BT09 278 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 PRDM12Q9H4Q4 367 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 SARS2Q9NP81 518 aaKnown RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 CHRAC1Q9NRG0 131 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 FAF1Q9UNN5 650 aaPredicted RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 RUVBL2Q9Y230 463 aaKnown RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 SCN9AQ15858 1988 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 A0A096LPK6 155 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 ADCY6O43306 1168 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 CLIC3O95833 236 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 PSMC3P17980 439 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 EEF1B2P24534 225 aaKnown RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 IGFBP6P24592 240 aaPredicted RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 CDH15P55291 814 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 NSUN2Q08J23 767 aaKnown RBP eCLIP8.55□□□□□ -1.04
SNX13-201ENST00000409076 PRKD1Q15139 912 aaPredicted RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 PARP6Q2NL67 630 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 CCDC14Q49A88 953 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 GK5Q6ZS86 529 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 SLC41A1Q8IVJ1 513 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 C12orf56Q8IXR9 622 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 PQLC3Q8N755 202 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 MAB21L3Q8N8X9 362 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 OR6Y1Q8NGX8 325 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 SPATA22Q8NHS9 363 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 ZNF778Q96MU6 729 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 LENG8Q96PV6 779 aaPredicted RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 SIX4Q9UIU6 781 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 ZNF214Q9UL59 606 aaPredicted RBP8.55□□□□□ -1.04
SNX13-201ENST00000409076 SSX2IPQ9Y2D8 614 aa8.55□□□□□ -1.04
SNX13-201ENST00000409076 ZNFX1Q9P2E3 1918 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 SIN3BO75182 1162 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 PIGNO95427 931 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 HOXC6P09630 235 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 NCAM1P13591 858 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 ALADP13716 330 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 ADCYAP1R1P41586 468 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 GALK1P51570 392 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 PLOD1Q02809 727 aaPredicted RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 CSHL1Q14406 222 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 SOWAHAQ2M3V2 549 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 TWF2Q6IBS0 349 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 B3GNT9Q6UX72 402 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.54□□□□□ -1.04
SNX13-201ENST00000409076 PIWIL2Q8TC59 973 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 HIC2Q96JB3 615 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 ELMO2Q96JJ3 720 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 HBEGFQ99075 208 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 NRDE2Q9H7Z3 1164 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 FAM8A1Q9UBU6 413 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 EGFL7Q9UHF1 273 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 ADAMTS6Q9UKP5 1117 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 SLC15A5A6NIM6 579 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 ZC3H11AO75152 810 aaKnown RBP eCLIP8.54□□□□□ -1.04
SNX13-201ENST00000409076 FARP2O94887 1054 aaPredicted RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 ABHD2P08910 425 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 ARF4P18085 180 aaPredicted RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 CDH13P55290 713 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 GRIK3Q13003 919 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 SDHAF4Q5VUM1 108 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 IRGCQ6NXR0 463 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 OTOP3Q7RTS5 596 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 DPP9Q86TI2 863 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 CAND1Q86VP6 1230 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 MYO1HQ8N1T3 1032 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 MAGEC3Q8TD91 643 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 TFB1MQ8WVM0 346 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 PCYT2Q99447 389 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 FERMT1Q9BQL6 677 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 MRPL1Q9BYD6 325 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 NXF3Q9H4D5 531 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 COG4Q9H9E3 785 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 DDIT4Q9NX09 232 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 DSEQ9UL01 958 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 BHMG1C9JSJ3 638 aaPredicted RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 IRF6O14896 467 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 MAGEB3O15480 346 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 AKAP10O43572 662 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 CRCPO75575 148 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 VAPBO95292 243 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 BPGMP07738 259 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 UGT1A6P19224 532 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 MAXP61244 160 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 PPP1R8Q12972 351 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 ACVR2BQ13705 512 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms