RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 CEP112Q8N8E3 955 aa21.15■□□□□ 0.98
CHKB-201ENST00000406938 ZSCAN18Q8TBC5 510 aaPredicted RBP21.15■□□□□ 0.98
CHKB-201ENST00000406938 SH3RF2Q8TEC5 729 aa21.15■□□□□ 0.98
CHKB-201ENST00000406938 AZIN2Q96A70 460 aa21.15■□□□□ 0.98
CHKB-201ENST00000406938 CDX2Q99626 313 aaPredicted RBP21.15■□□□□ 0.98
CHKB-201ENST00000406938 TDP1Q9NUW8 608 aa21.15■□□□□ 0.98
CHKB-201ENST00000406938 LSM7Q9UK45 103 aaKnown RBP21.15■□□□□ 0.98
CHKB-201ENST00000406938 VANGL2Q9ULK5 521 aa21.15■□□□□ 0.98
CHKB-201ENST00000406938 NR2E1Q9Y466 385 aa21.15■□□□□ 0.98
CHKB-201ENST00000406938 HELZP42694 1942 aaKnown RBP21.14■□□□□ 0.97
CHKB-201ENST00000406938 GOLGA6L7A0A1B0GV03 622 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 EPHB2P29323 1055 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 HCAR3P49019 387 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 TFDP2Q14188 446 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 ACBD5Q5T8D3 534 aaPredicted RBP21.14■□□□□ 0.97
CHKB-201ENST00000406938 SLC9A4Q6AI14 798 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 Q6ZNB5 142 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 MNS1Q8NEH6 495 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 SPATA4Q8NEY3 305 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 FGF13Q92913 245 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 TBC1D31Q96DN5 1066 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 DCLK3Q9C098 648 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 SH3BP1Q9Y3L3 701 aa21.14■□□□□ 0.97
CHKB-201ENST00000406938 RIOK3O14730 519 aaKnown RBP21.13■□□□□ 0.97
CHKB-201ENST00000406938 APOL1O14791 398 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 DAPK3O43293 454 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 LATS1O95835 1130 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 TACR2P21452 398 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 AMPD1P23109 780 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 HOXC13P31276 330 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 SLC6A4P31645 630 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 HTR7P34969 479 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 RWDD4Q6NW29 188 aaKnown RBP21.13■□□□□ 0.97
CHKB-201ENST00000406938 FBXL22Q6P050 247 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 ARID3BQ8IVW6 561 aaPredicted RBP21.13■□□□□ 0.97
CHKB-201ENST00000406938 ZNF683Q8IZ20 524 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 PLD5Q8N7P1 536 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 SMRP1Q8NCR6 262 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 LRRN4CLQ8ND94 238 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 RIN3Q8TB24 985 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 MAIP1Q8WWC4 291 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 HAUS1Q96CS2 278 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 RIPOR3Q96MK2 946 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 RBM12Q9NTZ6 932 aaKnown RBP21.13■□□□□ 0.97
CHKB-201ENST00000406938 STOML2Q9UJZ1 356 aa21.13■□□□□ 0.97
CHKB-201ENST00000406938 R3HDM2Q9Y2K5 976 aaKnown RBP21.13■□□□□ 0.97
CHKB-201ENST00000406938 XIRP2A4UGR9 3374 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 GOLGA6L10A0A0M3HER8 536 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 CTAGE15A4D2H0 777 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 CTAGE8P0CG41 777 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 C2orf54Q08AI8 447 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 ADGRF1Q5T601 910 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 NCBP2-AS2Q69YL0 99 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 RFWD3Q6PCD5 774 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 LRRC31Q6UY01 552 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 CTAGE6Q86UF2 777 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 CTAGE4Q8IX94 777 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 ETNK2Q9NVF9 386 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 MFHAS1Q9Y4C4 1052 aa21.12■□□□□ 0.97
CHKB-201ENST00000406938 F5H5T6 163 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 DCLK1O15075 740 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 ERCC2P18074 760 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 USP4Q13107 963 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 HABP4Q5JVS0 413 aaKnown RBP21.11■□□□□ 0.97
CHKB-201ENST00000406938 HTR3DQ70Z44 454 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 PRELID2Q8N945 189 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 ATG4AQ8WYN0 398 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 IGSF8Q969P0 613 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 MYEOVQ96EZ4 313 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 GUCD1Q96NT3 240 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 RPRD1AQ96P16 312 aaPredicted RBP21.11■□□□□ 0.97
CHKB-201ENST00000406938 FAM118BQ9BPY3 351 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 GDE1Q9NZC3 331 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 SAE1Q9UBE0 346 aaPredicted RBP21.11■□□□□ 0.97
CHKB-201ENST00000406938 EYSQ5T1H1 3165 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 IGLV3-10A0A075B6K4 115 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 APOC4-APOC2K7ER74 178 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 FGF10O15520 208 aaPredicted RBP21.11■□□□□ 0.97
CHKB-201ENST00000406938 APOC2P02655 101 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 PECAM1P16284 738 aaPredicted RBP21.11■□□□□ 0.97
CHKB-201ENST00000406938 WEE1P30291 646 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 MTHFRP42898 656 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 IRAK1P51617 712 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 CCDC85BQ15834 202 aaPredicted RBP21.11■□□□□ 0.97
CHKB-201ENST00000406938 ZNF77Q15935 545 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 BBS7Q8IWZ6 715 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 LGI2Q8N0V4 545 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 DEFB123Q8N688 67 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 RPGRIP1Q96KN7 1286 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 PRICKLE1Q96MT3 831 aaPredicted RBP21.11■□□□□ 0.97
CHKB-201ENST00000406938 ASB16Q96NS5 453 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 MPP6Q9NZW5 540 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 STIM2Q9P246 746 aa21.11■□□□□ 0.97
CHKB-201ENST00000406938 PPARGC1AQ9UBK2 798 aaKnown RBP21.11■□□□□ 0.97
CHKB-201ENST00000406938 E2F8A0AVK6 867 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 SLU7O95391 586 aaKnown RBP21.1■□□□□ 0.97
CHKB-201ENST00000406938 FOSL2P15408 326 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 TCF3P15923 654 aa21.1■□□□□ 0.97
CHKB-201ENST00000406938 ZFXP17010 805 aaPredicted RBP21.1■□□□□ 0.97
CHKB-201ENST00000406938 TGM2P21980 687 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms