RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 HCAR3P49019 387 aa22.72■■□□□ 1.23
EPCAM-202ENST00000405271 PIK3R6Q5UE93 754 aa22.72■■□□□ 1.23
EPCAM-202ENST00000405271 MS4A14Q96JA4 679 aa22.72■■□□□ 1.23
EPCAM-202ENST00000405271 KIF9Q9HAQ2 790 aa22.72■■□□□ 1.23
EPCAM-202ENST00000405271 GKN1Q9NS71 199 aa22.72■■□□□ 1.23
EPCAM-202ENST00000405271 HS3ST4Q9Y661 456 aa22.72■■□□□ 1.23
EPCAM-202ENST00000405271 ACSL4O60488 711 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 TJP3O95049 919 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 TPI1P60174 286 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 TFDP2Q14188 446 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 MS4A13Q5J8X5 152 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 NPAS3Q8IXF0 933 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 RNF157Q96PX1 679 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 SIK2Q9H0K1 926 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 CWC15Q9P013 229 aaKnown RBP22.71■■□□□ 1.23
EPCAM-202ENST00000405271 XPO7Q9UIA9 1087 aaKnown RBP22.71■■□□□ 1.23
EPCAM-202ENST00000405271 ZNF510Q9Y2H8 683 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 SH3BP1Q9Y3L3 701 aa22.71■■□□□ 1.23
EPCAM-202ENST00000405271 TRIOO75962 3097 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 MYOFQ9NZM1 2061 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 NYNRINQ9P2P1 1898 aaKnown RBP22.7■■□□□ 1.22
EPCAM-202ENST00000405271 CREB3O43889 395 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 GOT1P17174 413 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 MLLT6P55198 1093 aaPredicted RBP22.7■■□□□ 1.22
EPCAM-202ENST00000405271 MMRN1Q13201 1228 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 LONRF2Q1L5Z9 754 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 ANKRD20A8PQ5CZ79 823 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 MANEALQ5VSG8 457 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 GET4Q7L5D6 327 aaPredicted RBP22.7■■□□□ 1.22
EPCAM-202ENST00000405271 ZNF572Q7Z3I7 529 aaPredicted RBP22.7■■□□□ 1.22
EPCAM-202ENST00000405271 ANKS1BQ7Z6G8 1248 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.7■■□□□ 1.22
EPCAM-202ENST00000405271 RPGRIP1Q96KN7 1286 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 CSPG4P5Q96PW8 444 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 DDX50Q9BQ39 737 aaKnown RBP22.7■■□□□ 1.22
EPCAM-202ENST00000405271 MAK16Q9BXY0 300 aaKnown RBP22.7■■□□□ 1.22
EPCAM-202ENST00000405271 MAGEB5Q9BZ81 275 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 EPHX3Q9H6B9 360 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 TDP1Q9NUW8 608 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 STOML2Q9UJZ1 356 aa22.7■■□□□ 1.22
EPCAM-202ENST00000405271 LOC730098B7Z3J9 87 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 LEFTY2O00292 366 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 LRIG2O94898 1065 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 IL4RP24394 825 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 HOXC13P31276 330 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 ZXDBP98169 803 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 USP4Q13107 963 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 KLF1Q13351 362 aaPredicted RBP22.69■■□□□ 1.22
EPCAM-202ENST00000405271 Q6ZNB5 142 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 RFX8Q6ZV50 586 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 RFX6Q8HWS3 928 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 DENND1CQ8IV53 801 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 CEP112Q8N8E3 955 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 TBC1D31Q96DN5 1066 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 NECTIN4Q96NY8 510 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 PRMT1Q99873 361 aaKnown RBP22.69■■□□□ 1.22
EPCAM-202ENST00000405271 GDE1Q9NZC3 331 aa22.69■■□□□ 1.22
EPCAM-202ENST00000405271 E2F8A0AVK6 867 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 FAM72CH0Y354 149 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 KLKB1P03952 638 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 KRT10P13645 584 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 DPYSQ14117 519 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 FAM72AQ5TYM5 149 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 KAZNQ674X7 775 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 RAP1GAP2Q684P5 730 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 NADSYN1Q6IA69 706 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 FAM72DQ6L9T8 149 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 LRRC31Q6UY01 552 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 BBS12Q6ZW61 710 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 HTR3DQ70Z44 454 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 CHSY1Q86X52 802 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 FAM72BQ86X60 149 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 KIAA1958Q8N8K9 716 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 MNS1Q8NEH6 495 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 ZSCAN18Q8TBC5 510 aaPredicted RBP22.68■■□□□ 1.22
EPCAM-202ENST00000405271 FGF13Q92913 245 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 USP13Q92995 863 aaPredicted RBP22.68■■□□□ 1.22
EPCAM-202ENST00000405271 POMKQ9H5K3 350 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 CFAP97Q9P2B7 532 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 AGO1Q9UL18 857 aaKnown RBP22.68■■□□□ 1.22
EPCAM-202ENST00000405271 MIA3Q5JRA6 1907 aa22.68■■□□□ 1.22
EPCAM-202ENST00000405271 E9PAM4 449 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 F5H5T6 163 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 PDE2AO00408 941 aaPredicted RBP22.67■■□□□ 1.22
EPCAM-202ENST00000405271 FGF10O15520 208 aaPredicted RBP22.67■■□□□ 1.22
EPCAM-202ENST00000405271 GREM1O60565 184 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 PRAMEF12O95522 483 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 ZFXP17010 805 aaPredicted RBP22.67■■□□□ 1.22
EPCAM-202ENST00000405271 TACR2P21452 398 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 GGCXP38435 758 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 AUHQ13825 339 aaKnown RBP22.67■■□□□ 1.22
EPCAM-202ENST00000405271 SLC9A4Q6AI14 798 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 PCDH19Q8TAB3 1148 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 SH3RF2Q8TEC5 729 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 WBP2Q969T9 261 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 ZSWIM3Q96MP5 696 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 HERPUD2Q9BSE4 406 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 HEMGNQ9BXL5 484 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 ARHGEF4Q9NR80 690 aa22.67■■□□□ 1.22
EPCAM-202ENST00000405271 SMARCAL1Q9NZC9 954 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms