RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TSGA10Q9BZW7 698 aa30.33■■■□□ 2.45
USP42-202ENST00000404008 VANGL2Q9ULK5 521 aa30.33■■■□□ 2.45
USP42-202ENST00000404008 DOCK4Q8N1I0 1966 aa30.33■■■□□ 2.45
USP42-202ENST00000404008 KRBA1A5PL33 1030 aa30.32■■■□□ 2.44
USP42-202ENST00000404008 NRG1Q02297 640 aaPredicted RBP30.32■■■□□ 2.44
USP42-202ENST00000404008 ARTNQ5T4W7 220 aa30.32■■■□□ 2.44
USP42-202ENST00000404008 ERMARDQ5T6L9 678 aa30.32■■■□□ 2.44
USP42-202ENST00000404008 HJURPQ8NCD3 748 aaPredicted RBP30.32■■■□□ 2.44
USP42-202ENST00000404008 MSANTD3Q96H12 275 aa30.32■■■□□ 2.44
USP42-202ENST00000404008 SNRNP25Q9BV90 132 aaKnown RBP30.32■■■□□ 2.44
USP42-202ENST00000404008 COL25A1Q9BXS0 654 aaPredicted RBP30.32■■■□□ 2.44
USP42-202ENST00000404008 MAGEB5Q9BZ81 275 aa30.32■■■□□ 2.44
USP42-202ENST00000404008 PLK2Q9NYY3 685 aa30.32■■■□□ 2.44
USP42-202ENST00000404008 OR12D3Q9UGF7 316 aa30.32■■■□□ 2.44
USP42-202ENST00000404008 AP4E1Q9UPM8 1137 aa30.32■■■□□ 2.44
USP42-202ENST00000404008 PPP2R2CQ9Y2T4 447 aa30.32■■■□□ 2.44
USP42-202ENST00000404008 ALADP13716 330 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 HOXD9P28356 352 aaPredicted RBP30.31■■■□□ 2.44
USP42-202ENST00000404008 RPS24P62847 133 aaKnown RBP30.31■■■□□ 2.44
USP42-202ENST00000404008 AMPD2Q01433 879 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 PRKCQQ04759 706 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 SIGLEC14Q08ET2 396 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 C5orf22Q49AR2 442 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 MPP7Q5T2T1 576 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 C11orf63Q6NUN7 778 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 ZNF662Q6ZS27 426 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 TPRG1Q6ZUI0 275 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 PSTKQ8IV42 348 aaKnown RBP30.31■■■□□ 2.44
USP42-202ENST00000404008 CFAP52Q8N1V2 620 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 IGSF8Q969P0 613 aa30.31■■■□□ 2.44
USP42-202ENST00000404008 MACROD2A1Z1Q3 448 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 SHISA7A6NL88 538 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 CACNG3O60359 315 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 SLC1A1P43005 524 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 SSR1P43307 286 aaKnown RBP30.3■■■□□ 2.44
USP42-202ENST00000404008 NAP1L1P55209 391 aaKnown RBP30.3■■■□□ 2.44
USP42-202ENST00000404008 RABGAP1LQ5R372 815 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 TTC39BQ5VTQ0 682 aaPredicted RBP30.3■■■□□ 2.44
USP42-202ENST00000404008 RNF43Q68DV7 783 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 TXNRD3NBQ6F5E7 133 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 C12orf40Q86WS4 652 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 ETFBKMTQ8IXQ9 262 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 SIX5Q8N196 739 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 PYROXD2Q8N2H3 581 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 RPRD1AQ96P16 312 aaPredicted RBP30.3■■■□□ 2.44
USP42-202ENST00000404008 ZWILCHQ9H900 591 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 GPATCH2LQ9NWQ4 482 aa30.3■■■□□ 2.44
USP42-202ENST00000404008 IGLV3-10A0A075B6K4 115 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 TYW5A2RUC4 315 aaKnown RBP30.29■■■□□ 2.44
USP42-202ENST00000404008 E9PAM4 449 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 FAM72CH0Y354 149 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 KRT86O43790 486 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 TBL1XO60907 577 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 OPRD1P41143 372 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 TAS2R40P59535 323 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 HADHQ16836 314 aaKnown RBP30.29■■■□□ 2.44
USP42-202ENST00000404008 BOLA3Q53S33 107 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 FAM72AQ5TYM5 149 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 MANEALQ5VSG8 457 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 FAM72DQ6L9T8 149 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 TXNDC11Q6PKC3 985 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 LRRC31Q6UY01 552 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 FAM72BQ86X60 149 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 NAT16Q8N8M0 369 aa30.29■■■□□ 2.44
USP42-202ENST00000404008 PI4K2BG5E9Z4 385 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 EIF2DP41214 584 aaKnown RBP30.28■■■□□ 2.44
USP42-202ENST00000404008 CA9Q16790 459 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 SMTNL2Q2TAL5 461 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 KCNT1Q5JUK3 1230 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 NAIF1Q69YI7 327 aaPredicted RBP30.28■■■□□ 2.44
USP42-202ENST00000404008 C1orf228Q6PIY5 440 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 TEKT4Q8WW24 435 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 XPO6Q96QU8 1125 aaKnown RBP30.28■■■□□ 2.44
USP42-202ENST00000404008 GOLPH3Q9H4A6 298 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 DHX35Q9H5Z1 703 aaKnown RBP30.28■■■□□ 2.44
USP42-202ENST00000404008 HYOU1Q9Y4L1 999 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 ALG6Q9Y672 507 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 DRGXA6NNA5 263 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 TNFRSF10AO00220 468 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 SRGAP2O75044 1071 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 RARAP10276 462 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 COMTP21964 271 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 L1CAMP32004 1257 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 SLC6A11P48066 632 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 IRAK1P51617 712 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 STARD6P59095 220 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 SEMA3BQ13214 749 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 IFI16Q16666 785 aaKnown RBP30.28■■■□□ 2.44
USP42-202ENST00000404008 DAAM2Q86T65 1068 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 RNF10Q8N5U6 811 aaKnown RBP30.28■■■□□ 2.44
USP42-202ENST00000404008 SHDQ96IW2 340 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 STIM2Q9P246 746 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 PPARGC1AQ9UBK2 798 aaKnown RBP30.28■■■□□ 2.44
USP42-202ENST00000404008 FBXO10Q9UK96 956 aa30.28■■■□□ 2.44
USP42-202ENST00000404008 MAN2B1O00754 1011 aa30.27■■■□□ 2.44
USP42-202ENST00000404008 TULP3O75386 442 aa30.27■■■□□ 2.44
USP42-202ENST00000404008 MOCS3O95396 460 aa30.27■■■□□ 2.44
USP42-202ENST00000404008 TRIM67Q6ZTA4 783 aa30.27■■■□□ 2.44
USP42-202ENST00000404008 CIR1Q86X95 450 aaPredicted RBP30.27■■■□□ 2.44
USP42-202ENST00000404008 HSPH1Q92598 858 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms