RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 RD3Q7Z3Z2 195 aa12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 EPS8L3Q8TE67 593 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 DPY30Q9C005 99 aa12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 LRRC7Q96NW7 1537 aa12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 MAN2A2P49641 1150 aa12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 DHRS1Q96LJ7 313 aa12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 SPATA33Q96N06 139 aa12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 VPS35Q96QK1 796 aa12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 RNF181Q9P0P0 153 aa12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 CRNNQ9UBG3 495 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-209ENST00000399603 TET3O43151 1660 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 MDM4O15151 490 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 TDP2O95551 362 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 PSME3P61289 254 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 C10orf120Q5SQS8 335 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 CCNI2Q6ZMN8 369 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 AKAP14Q86UN6 197 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 OR6Y1Q8NGX8 325 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 PHF21BQ96EK2 531 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 MED15Q96RN5 788 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 ACTR8Q9H981 624 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 TRIM17Q9Y577 477 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 USP46P62068 366 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 SPP2Q13103 211 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 DHFR2Q86XF0 187 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 MINDY2Q8NBR6 621 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 HTRA1Q92743 480 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 MTFMTQ96DP5 389 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 CLIP3Q96DZ5 547 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 BBS4Q96RK4 519 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 C2orf40Q9H1Z8 148 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 TTYH1Q9H313 450 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 RRN3Q9NYV6 651 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 CNOT7Q9UIV1 285 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 ZDHHC9Q9Y397 364 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 IRAK3Q9Y616 596 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 MTSS1O43312 755 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 ACOT2P49753 483 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 DEFA5Q01523 94 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 CDH18Q13634 790 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 RFX4Q33E94 735 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 AADACL4Q5VUY2 407 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 EXOC3L1Q86VI1 746 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 SP8Q8IXZ3 490 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 DHRSXQ8N5I4 330 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 ZNF354BQ96LW1 612 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 RASSF1Q9NS23 344 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 PRELID1Q9Y255 219 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 TDRKHQ9Y2W6 561 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 ADGRB3O60242 1522 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 ZSCAN5BA6NJL1 495 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 G3V2T6 193 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 PLA2G6O60733 806 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 HARS2P49590 506 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 TRIM28Q13263 835 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 CSHL1Q14406 222 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 ZIK1Q3SY52 487 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 B3GNT6Q6ZMB0 384 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 NSUN4Q96CB9 384 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 IL25Q9H293 177 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 ARHGAP28Q9P2N2 729 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 KLF15Q9UIH9 416 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 NPHP3-ACAD11A0A0J9YXS1 232 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 C2CD2LO14523 706 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 POLD2P49005 469 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 MAZP56270 477 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 NAPEPLDQ6IQ20 393 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 CCDC54Q8NEL0 328 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 OSCP1Q8WVF1 389 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 TRPV5Q9NQA5 729 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 CCDC189A1A4V9 331 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 MSH4O15457 936 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 LTFP02788 710 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 GLI2P10070 1586 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 SENP6Q9GZR1 1112 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 RHBGQ9H310 441 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 RNF146Q9NTX7 359 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 HIF3AQ9Y2N7 669 aa12.76□□□□□ -0.37
CACNA1C-209ENST00000399603 SPATA31A1Q5TZJ5 1347 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 TSPAN3O60637 253 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 KDM4BO94953 1096 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 CTSHP09668 335 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 ATP2C1P98194 919 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 PROX1Q92786 737 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 ZNF180Q9UJW8 692 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 L1RE1Q9UN81 338 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 SCAF8Q9UPN6 1271 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 RNF17Q9BXT8 1623 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 ZBTB11O95625 1053 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 NTSR2O95665 410 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 ASS1P00966 412 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 BGNP21810 368 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 CDH3P22223 829 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 GALK1P51570 392 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 MSLNQ13421 630 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 HPF1Q9NWY4 346 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 NUDT5Q9UKK9 219 aa12.75□□□□□ -0.37
CACNA1C-209ENST00000399603 TAF6LQ9Y6J9 622 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 980 ms