RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 CCDC105Q8IYK2 499 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 PHTF2Q8N3S3 785 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 CCDC112Q8NEF3 446 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 FLCNQ8NFG4 579 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 ARHGEF26Q96DR7 871 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 CALR3Q96L12 384 aaKnown RBP18.28■□□□□ 0.52
CTNS-203ENST00000399306 HS3ST4Q9Y661 456 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 DOCK4Q8N1I0 1966 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 ZNF318Q5VUA4 2279 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 IGLV3-10A0A075B6K4 115 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 MYO1FO00160 1098 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 STK25O00506 426 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 PDGFBP01127 241 aaPredicted RBP18.27■□□□□ 0.52
CTNS-203ENST00000399306 APODP05090 189 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 CISD3P0C7P0 127 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 HTR7P34969 479 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 MAGEA1P43355 309 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 TNFRSF4P43489 277 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 VCPP55072 806 aaKnown RBP18.27■□□□□ 0.52
CTNS-203ENST00000399306 HADHBP55084 474 aaKnown RBP18.27■□□□□ 0.52
CTNS-203ENST00000399306 OXCT1P55809 520 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 ZNF252P-AS1Q0IIN9 211 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 FZD5Q13467 585 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 AUHQ13825 339 aaKnown RBP18.27■□□□□ 0.52
CTNS-203ENST00000399306 TXLNBQ8N3L3 684 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.27■□□□□ 0.52
CTNS-203ENST00000399306 ZNF564Q8TBZ8 553 aaPredicted RBP18.27■□□□□ 0.52
CTNS-203ENST00000399306 RFFLQ8WZ73 363 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 ANP32BQ92688 251 aaKnown RBP18.27■□□□□ 0.52
CTNS-203ENST00000399306 DNAJC17Q9NVM6 304 aaKnown RBP18.27■□□□□ 0.52
CTNS-203ENST00000399306 DLGAP2Q9P1A6 1054 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 PPARGC1AQ9UBK2 798 aaKnown RBP18.27■□□□□ 0.52
CTNS-203ENST00000399306 XPO7Q9UIA9 1087 aaKnown RBP18.27■□□□□ 0.52
CTNS-203ENST00000399306 ANAPC7Q9UJX3 599 aa18.27■□□□□ 0.52
CTNS-203ENST00000399306 A0A0A6YYK5 440 aaPredicted RBP18.26■□□□□ 0.51
CTNS-203ENST00000399306 GOLGA6L7A0A1B0GV03 622 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 A0A1B0GVM2 712 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 TCAF2A6NFQ2 919 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 DRGXA6NNA5 263 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 I6L893 689 aaPredicted RBP18.26■□□□□ 0.51
CTNS-203ENST00000399306 KAT7O95251 611 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 CD72P21854 359 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 MAN1A1P33908 653 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 ARHGAP25P42331 645 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 DGKGP49619 791 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 ZNF135P52742 658 aaPredicted RBP18.26■□□□□ 0.51
CTNS-203ENST00000399306 ATXN1P54253 815 aaKnown RBP18.26■□□□□ 0.51
CTNS-203ENST00000399306 HSF5Q4G112 596 aaPredicted RBP18.26■□□□□ 0.51
CTNS-203ENST00000399306 SH3PXD2AQ5TCZ1 1133 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 RAP1GAP2Q684P5 730 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 GRAMD4Q6IC98 578 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 FSTL4Q6MZW2 842 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 FBXL22Q6P050 247 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 RFWD3Q6PCD5 774 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 LRRC31Q6UY01 552 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 CHST9Q7L1S5 443 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 KIAA0907Q7Z7F0 614 aaPredicted RBP18.26■□□□□ 0.51
CTNS-203ENST00000399306 SLFN11Q7Z7L1 901 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 C12orf40Q86WS4 652 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 ZNF683Q8IZ20 524 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 LGI2Q8N0V4 545 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 TERB1Q8NA31 727 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 FIBINQ8TAL6 211 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 WFIKKN2Q8TEU8 576 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 PRICKLE1Q96MT3 831 aaPredicted RBP18.26■□□□□ 0.51
CTNS-203ENST00000399306 PACSIN1Q9BY11 444 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 FOXQ1Q9C009 403 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 CHRDQ9H2X0 955 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 ANLNQ9NQW6 1124 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 ARHGEF4Q9NR80 690 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 CTTNBP2NLQ9P2B4 639 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 STARD13Q9Y3M8 1113 aa18.26■□□□□ 0.51
CTNS-203ENST00000399306 SOWAHDA6NJG2 315 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 TIMM44O43615 452 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 TBL1XO60907 577 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 SLC6A11P48066 632 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 KRT83P78385 493 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 SLC12A1Q13621 1099 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 EIF4HQ15056 248 aaKnown RBP18.25■□□□□ 0.51
CTNS-203ENST00000399306 EFHC2Q5JST6 749 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 CCDC117Q8IWD4 279 aaPredicted RBP18.25■□□□□ 0.51
CTNS-203ENST00000399306 P2RY11Q96G91 374 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 TRIM7Q9C029 511 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 LMAN1LQ9HAT1 526 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 FBRSL1Q9HCM7 1045 aaKnown RBP18.25■□□□□ 0.51
CTNS-203ENST00000399306 NDRG2Q9UN36 371 aaKnown RBP18.25■□□□□ 0.51
CTNS-203ENST00000399306 MTF2Q9Y483 593 aaPredicted RBP18.25■□□□□ 0.51
CTNS-203ENST00000399306 PCDHA13Q9Y5I0 950 aa18.25■□□□□ 0.51
CTNS-203ENST00000399306 MYO18AQ92614 2054 aaKnown RBP18.25■□□□□ 0.51
CTNS-203ENST00000399306 BTNL10A8MVZ5 291 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 CHURC1-FNTBB4DL54 471 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 NPC1O15118 1278 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 NRDCO43847 1150 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 TSPAN3O60637 253 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 LRCH4O75427 683 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 CLDN11O75508 207 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 AVPR2P30518 371 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 L1CAMP32004 1257 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 CDH4P55283 916 aa18.24■□□□□ 0.51
CTNS-203ENST00000399306 MRPS21P82921 87 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms