RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ERCC2P18074 760 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 ALDH7A1P49419 539 aaKnown RBP15.61■□□□□ 0.09
COL25A1-201ENST00000399126 EIF4EBP2Q13542 120 aaPredicted RBP15.61■□□□□ 0.09
COL25A1-201ENST00000399126 SLC45A4Q5BKX6 768 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 VSTM1Q6UX27 236 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 C11orf49Q9H6J7 331 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 ABCC13Q9NSE7 274 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 RCOR3Q9P2K3 495 aaPredicted RBP15.61■□□□□ 0.09
COL25A1-201ENST00000399126 OR12D3Q9UGF7 316 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 DCLK1O15075 740 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 IRAK2O43187 625 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 LRIG2O94898 1065 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 ZFXP17010 805 aaPredicted RBP15.61■□□□□ 0.09
COL25A1-201ENST00000399126 EIF3BP55884 814 aaKnown RBP15.61■□□□□ 0.09
COL25A1-201ENST00000399126 TPI1P60174 286 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 PDIA2Q13087 525 aaKnown RBP15.61■□□□□ 0.09
COL25A1-201ENST00000399126 DNAJC5GQ8N7S2 189 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 N4BP2L2Q92802 583 aaPredicted RBP15.61■□□□□ 0.09
COL25A1-201ENST00000399126 ARMC5Q96C12 935 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 RTP4Q96DX8 246 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 C8orf48Q96LL4 319 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 QKIQ96PU8 341 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL25A1-201ENST00000399126 SIK2Q9H0K1 926 aa15.61■□□□□ 0.09
COL25A1-201ENST00000399126 SPATS2LQ9NUQ6 558 aaKnown RBP15.61■□□□□ 0.09
COL25A1-201ENST00000399126 WDR27A2RRH5 827 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 ANKRD65E5RJM6 399 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 AVILO75366 819 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 METTL18O95568 372 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 TBX18O95935 607 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 HSPA8P11142 646 aaKnown RBP15.6■□□□□ 0.09
COL25A1-201ENST00000399126 LBX1P52954 281 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 IFI35P80217 286 aaPredicted RBP15.6■□□□□ 0.09
COL25A1-201ENST00000399126 GPR17Q13304 367 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 HIF1AQ16665 826 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 ZNF483Q8TF39 744 aaPredicted RBP15.6■□□□□ 0.09
COL25A1-201ENST00000399126 RRN3Q9NYV6 651 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 PIAS1O75925 651 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 F9P00740 461 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 SRGAP2BP0DMP2 458 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 NR1D1P20393 614 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 NR2C2P49116 596 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 MAGOHP61326 146 aaKnown RBP15.6■□□□□ 0.09
COL25A1-201ENST00000399126 KCNJ11Q14654 390 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 GIPC2Q8TF65 315 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 DEPDC1BQ8WUY9 529 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 PRDM12Q9H4Q4 367 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 SCML2Q9UQR0 700 aa15.6■□□□□ 0.09
COL25A1-201ENST00000399126 EFEMP2O95967 443 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 MOCS2O96007 188 aaPredicted RBP15.59■□□□□ 0.09
COL25A1-201ENST00000399126 AP1B1Q10567 949 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 SKIV2LQ15477 1246 aaKnown RBP15.59■□□□□ 0.09
COL25A1-201ENST00000399126 ARL13BQ3SXY8 428 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 SPOUT1Q5T280 376 aaKnown RBP15.59■□□□□ 0.09
COL25A1-201ENST00000399126 DENND5BQ6ZUT9 1274 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 CDKL3Q8IVW4 592 aaPredicted RBP15.59■□□□□ 0.09
COL25A1-201ENST00000399126 AGGF1Q8N302 714 aaeCLIP15.59■□□□□ 0.09
COL25A1-201ENST00000399126 FBXO22Q8NEZ5 403 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 TOP1MTQ969P6 601 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 IGSF21Q96ID5 467 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 SMOC2Q9H3U7 446 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 PTPRSQ13332 1948 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 ATF6P18850 670 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 EPHB2P29323 1055 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 MAGEA11P43364 429 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 CCDC38Q502W7 563 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 HEATR6Q6AI08 1181 aaKnown RBP15.59■□□□□ 0.09
COL25A1-201ENST00000399126 C16orf87Q6PH81 154 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 LRRC31Q6UY01 552 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 ANKS3Q6ZW76 656 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 RELL1Q8IUW5 271 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 CCNYQ8ND76 341 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 TFB1MQ8WVM0 346 aaKnown RBP15.59■□□□□ 0.09
COL25A1-201ENST00000399126 ETNK1Q9HBU6 452 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 PAK5Q9P286 719 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 NEU3Q9UQ49 428 aa15.59■□□□□ 0.09
COL25A1-201ENST00000399126 RASGRF2O14827 1237 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 OR1D2P34982 312 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 AIF1P55008 147 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 ELAVL2Q12926 359 aaKnown RBP15.58■□□□□ 0.08
COL25A1-201ENST00000399126 TAF10Q12962 218 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 XRCC4Q13426 336 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 AUHQ13825 339 aaKnown RBP15.58■□□□□ 0.08
COL25A1-201ENST00000399126 BBS9Q3SYG4 887 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 PCGF5Q86SE9 256 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 IGDCC3Q8IVU1 814 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 ARMC2Q8NEN0 867 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 HTR3CQ8WXA8 447 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 SEPT10Q9P0V9 454 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 PAGE1O75459 146 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 APRTP07741 180 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 PAFAH1B3Q15102 231 aaKnown RBP15.58■□□□□ 0.08
COL25A1-201ENST00000399126 PSMD5Q16401 504 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 ARTNQ5T4W7 220 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 RASIP1Q5U651 963 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 CENPUQ71F23 418 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 HOOK3Q86VS8 718 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 MON1AQ86VX9 555 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 P2RY11Q96G91 374 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 CELF6Q96J87 481 aaKnown RBP15.58■□□□□ 0.08
COL25A1-201ENST00000399126 ARHGEF38Q9NXL2 777 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms