RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 COL1A2P08123 1366 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 MEI4A8MW99 385 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 C6orf222P0C671 652 aaPredicted RBP26.3■■□□□ 1.8
COL13A1-203ENST00000398969 PGAM1P18669 254 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 MGAT1P26572 445 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 SESN2P58004 480 aaPredicted RBP26.3■■□□□ 1.8
COL13A1-203ENST00000398969 PCLAFQ15004 111 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 C1orf146Q5VVC0 180 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 ZNF467Q7Z7K2 595 aaPredicted RBP26.3■■□□□ 1.8
COL13A1-203ENST00000398969 ANKRD52Q8NB46 1076 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 PARK7Q99497 189 aaKnown RBP26.3■■□□□ 1.8
COL13A1-203ENST00000398969 PLEKHA5Q9HAU0 1116 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 EIF2B3Q9NR50 452 aaKnown RBP26.3■■□□□ 1.8
COL13A1-203ENST00000398969 SOX13Q9UN79 622 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 PSAT1Q9Y617 370 aa26.3■■□□□ 1.8
COL13A1-203ENST00000398969 RPL34P49207 117 aaKnown RBP26.29■■□□□ 1.8
COL13A1-203ENST00000398969 ERFP50548 548 aa26.29■■□□□ 1.8
COL13A1-203ENST00000398969 BCAT1P54687 386 aa26.29■■□□□ 1.8
COL13A1-203ENST00000398969 IRX1P78414 480 aaPredicted RBP26.29■■□□□ 1.8
COL13A1-203ENST00000398969 DCAF4L1Q3SXM0 396 aa26.29■■□□□ 1.8
COL13A1-203ENST00000398969 MAMDC4Q6UXC1 1216 aa26.29■■□□□ 1.8
COL13A1-203ENST00000398969 GPR142Q7Z601 462 aa26.29■■□□□ 1.8
COL13A1-203ENST00000398969 LRRC52Q8N7C0 313 aa26.29■■□□□ 1.8
COL13A1-203ENST00000398969 ATP2A3Q93084 1043 aa26.29■■□□□ 1.8
COL13A1-203ENST00000398969 C18orf25Q96B23 403 aaPredicted RBP26.29■■□□□ 1.8
COL13A1-203ENST00000398969 SNX27Q96L92 541 aa26.29■■□□□ 1.8
COL13A1-203ENST00000398969 DCDC2Q9UHG0 476 aa26.29■■□□□ 1.8
COL13A1-203ENST00000398969 MFSD11O43934 449 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 ARL4AP40617 200 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 NAIF1Q69YI7 327 aaPredicted RBP26.28■■□□□ 1.8
COL13A1-203ENST00000398969 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.28■■□□□ 1.8
COL13A1-203ENST00000398969 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.28■■□□□ 1.8
COL13A1-203ENST00000398969 SCOCQ9UIL1 159 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 RNF103O00237 685 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 SERPINE1P05121 402 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 PRKCGP05129 697 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 ITGA2BP08514 1039 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 AP2B1P63010 937 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 NAB1Q13506 487 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 ZBTB6Q15916 424 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 OR52E8Q6IFG1 317 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 STRADAQ7RTN6 431 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 CCNJLQ8IV13 435 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 C16orf70Q9BSU1 422 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 KATNBL1Q9H079 304 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 GPAMQ9HCL2 828 aa26.28■■□□□ 1.8
COL13A1-203ENST00000398969 A0A088AWK7 358 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 RBM47A0AV96 593 aaKnown RBP26.27■■□□□ 1.8
COL13A1-203ENST00000398969 ATG14Q6ZNE5 492 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 FAM131BQ86XD5 332 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 PPTC7Q8NI37 304 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 DNAJB4Q9UDY4 337 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 FZD10Q9ULW2 581 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 APOBEC2Q9Y235 224 aaKnown RBP26.27■■□□□ 1.8
COL13A1-203ENST00000398969 OPHN1O60890 802 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 SNAI1O95863 264 aaPredicted RBP26.27■■□□□ 1.8
COL13A1-203ENST00000398969 PDGFRBP09619 1106 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 GRB14Q14449 540 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 MAVSQ7Z434 540 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 DPP9Q86TI2 863 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 NETO2Q8NC67 525 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 SORT1Q99523 831 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 NDE1Q9NXR1 346 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 RCOR3Q9P2K3 495 aaPredicted RBP26.27■■□□□ 1.8
COL13A1-203ENST00000398969 RALGAPA2Q2PPJ7 1873 aa26.27■■□□□ 1.8
COL13A1-203ENST00000398969 MAP3K13O43283 966 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 KLHL2O95198 593 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 PROCP04070 461 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 PDE1BQ01064 536 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 FAM110CQ1W6H9 321 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 GLRA4Q5JXX5 417 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 BSPRYQ5W0U4 402 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 CST9Q5W186 159 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 C10orf107Q8IVU9 208 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 BEST2Q8NFU1 509 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 GATA6Q92908 595 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 P2RY11Q96G91 374 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 CEP41Q9BYV8 373 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 SYBUQ9NX95 663 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 DDX43Q9NXZ2 648 aaKnown RBP26.26■■□□□ 1.79
COL13A1-203ENST00000398969 ASB3Q9Y575 518 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 STK10O94804 968 aaKnown RBP26.26■■□□□ 1.79
COL13A1-203ENST00000398969 HOXA11P31270 313 aaPredicted RBP26.26■■□□□ 1.79
COL13A1-203ENST00000398969 ADCYAP1R1P41586 468 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 SLC25A3Q00325 362 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 MARCH8Q5T0T0 291 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 TMCO4Q5TGY1 634 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 SLC25A41Q8N5S1 370 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 KBTBD7Q8WVZ9 684 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 PPM1HQ9ULR3 514 aa26.26■■□□□ 1.79
COL13A1-203ENST00000398969 ENO4A6NNW6 628 aa26.25■■□□□ 1.79
COL13A1-203ENST00000398969 SIN3BO75182 1162 aa26.25■■□□□ 1.79
COL13A1-203ENST00000398969 HIC1Q14526 733 aa26.25■■□□□ 1.79
COL13A1-203ENST00000398969 SMAD1Q15797 465 aaKnown RBP26.25■■□□□ 1.79
COL13A1-203ENST00000398969 PPM1JQ5JR12 505 aa26.25■■□□□ 1.79
COL13A1-203ENST00000398969 C9orf57Q5W0N0 161 aa26.25■■□□□ 1.79
COL13A1-203ENST00000398969 ZNF410Q86VK4 478 aa26.25■■□□□ 1.79
COL13A1-203ENST00000398969 CRYBG2Q8N1P7 616 aa26.25■■□□□ 1.79
COL13A1-203ENST00000398969 SHKBP1Q8TBC3 707 aa26.25■■□□□ 1.79
COL13A1-203ENST00000398969 NAT9Q9BTE0 207 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms