RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 KRT9P35527 623 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 SGSHP51688 502 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 SNX16P57768 344 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 KCNJ12Q14500 433 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 FAM133BQ5BKY9 247 aaKnown RBP13.92□□□□□ -0.18
VCX3A-202ENST00000398729 MIIPQ5JXC2 388 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 TMEM215Q68D42 235 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 TAC4Q86UU9 113 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 PASD1Q8IV76 773 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.92□□□□□ -0.18
VCX3A-202ENST00000398729 HJURPQ8NCD3 748 aaPredicted RBP13.92□□□□□ -0.18
VCX3A-202ENST00000398729 DEFB124Q8NES8 71 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 ADAM32Q8TC27 787 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 SLC39A13Q96H72 371 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 PPP1R13BQ96KQ4 1090 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 SLC6A17Q9H1V8 727 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 LHX5Q9H2C1 402 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 PRDM16Q9HAZ2 1276 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 GGA2Q9UJY4 613 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 AJAP1Q9UKB5 411 aaPredicted RBP13.92□□□□□ -0.18
VCX3A-202ENST00000398729 CYP8B1Q9UNU6 501 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 PLA2G4CQ9UP65 541 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 CEP83Q9Y592 693 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 TNRC6BQ9UPQ9 1833 aaKnown RBP13.92□□□□□ -0.18
VCX3A-202ENST00000398729 LOC400499M0QZD8 3231 aa13.92□□□□□ -0.18
VCX3A-202ENST00000398729 TMEM8BA6NDV4 472 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 FOXN3O00409 490 aaPredicted RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 NDUFS2O75306 463 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 TRUB2O95900 331 aaKnown RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 ATP5BP06576 529 aaKnown RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 EPHX1P07099 455 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 GLI1P08151 1106 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 PRKCHP24723 683 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 HOXD12P35452 270 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 BPIFB4P59827 614 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 ZNF33AQ06730 810 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 UAP1L1Q3KQV9 507 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 TRIM61Q5EBN2 209 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 TCP11X2Q5H9J9 407 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 EFHC1Q5JVL4 640 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 NADSYN1Q6IA69 706 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 KIAA0907Q7Z7F0 614 aaPredicted RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 METTL3Q86U44 580 aaKnown RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 MFN1Q8IWA4 741 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 WDTC1Q8N5D0 677 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 DEFB119Q8N690 84 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 CPXM1Q96SM3 734 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 NUSAP1Q9BXS6 441 aaKnown RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 MKRN2Q9H000 416 aaKnown RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 SAMSN1Q9NSI8 373 aaKnown RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 TMEM74BQ9NUR3 256 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 STIM2Q9P246 746 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 EVLQ9UI08 416 aaPredicted RBP13.91□□□□□ -0.18
VCX3A-202ENST00000398729 NFE2L3Q9Y4A8 694 aa13.91□□□□□ -0.18
VCX3A-202ENST00000398729 GOLGA6L22H0YM25 854 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 TAF4O00268 1085 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 HYAL3O43820 417 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 MOCS2O96007 188 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 IGLV3-25P01717 112 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 CAPNS1P04632 268 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 PNMA6AP0CW24 399 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 POLR2EP19388 210 aaKnown RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 ITPKAP23677 461 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 EEF1GP26641 437 aaKnown RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 CLCN1P35523 988 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 CDK17Q00537 523 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 KCNMA1Q12791 1236 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 LMAN2Q12907 356 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 RAPGEF1Q13905 1077 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 DRAP1Q14919 205 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 FNDC3BQ53EP0 1204 aaKnown RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 DCAF6Q58WW2 860 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 MS4A13Q5J8X5 152 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 MBLAC2Q68D91 279 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 PIP4P1Q86T03 277 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 ADIPOR2Q86V24 386 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 SLC47A2Q86VL8 602 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 TMPRSS6Q8IU80 811 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 FAM71AQ8IYT1 594 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 C1orf131Q8NDD1 294 aaKnown RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 ENOX1Q8TC92 643 aaKnown RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 CYB5D2Q8WUJ1 264 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 PRCCQ92733 491 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 SIPA1Q96FS4 1042 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 PRICKLE1Q96MT3 831 aaPredicted RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 NUCKS1Q9H1E3 243 aaKnown RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 PDCL3Q9H2J4 239 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 TMEM245Q9H330 911 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 SYNCQ9H7C4 482 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 ASNSD1Q9NWL6 643 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 USP36Q9P275 1121 aaKnown RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 TJP2Q9UDY2 1190 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 SLC12A6Q9UHW9 1150 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 PILRBQ9UKJ0 227 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 FLNBO75369 2602 aaKnown RBP13.9□□□□□ -0.18
VCX3A-202ENST00000398729 CKAP5Q14008 2032 aa13.9□□□□□ -0.18
VCX3A-202ENST00000398729 ATXN2Q99700 1313 aaKnown RBP13.9□□□□□ -0.19
VCX3A-202ENST00000398729 ASXL3Q9C0F0 2248 aa13.89□□□□□ -0.19
VCX3A-202ENST00000398729 HSF2BPO75031 334 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms