RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 EXO5Q9H790 373 aa14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 PIH1D1Q9NWS0 290 aaKnown RBP14.58□□□□□ -0.07
PCDHA11-201ENST00000398640 GTF2E2P29084 291 aaKnown RBP14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 MARSP56192 900 aaKnown RBP14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 PABPC1LQ4VXU2 614 aaKnown RBP14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 GRIN3AQ8TCU5 1115 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 CAAP1Q9H8G2 361 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 CERS4Q9HA82 394 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 KRT84Q9NSB2 600 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 ERI2A8K979 691 aaKnown RBP14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 MTA2O94776 668 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 CLTBP09497 229 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 NDST1P52848 882 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 TRIP4Q15650 581 aaPredicted RBP14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 C10orf71Q711Q0 1435 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 TAS1R2Q8TE23 839 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 SLC20A1Q8WUM9 679 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 RXFP2Q8WXD0 754 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 NSL1Q96IY1 281 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 ELOVL4Q9GZR5 314 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 SOHLH2Q9NX45 425 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 DOT1LQ8TEK3 1739 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 RASSF10A6NK89 507 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 MEIS2O14770 477 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 GLP2RO95838 553 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 RTP1P59025 263 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 PDK2Q15119 407 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 SYN2Q92777 582 aaPredicted RBP14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 LPPQ93052 612 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 NLNQ9BYT8 704 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 TOPAZ1Q8N9V7 1692 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 A0A087X0T9 212 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 ABCB1P08183 1280 aaPredicted RBP14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 FAM228BP0C875 321 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 MARK2Q7KZI7 788 aaKnown RBP14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 IL31RAQ8NI17 732 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 ACOX2Q99424 681 aa14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 PPIEQ9UNP9 301 aaKnown RBP14.58□□□□□ -0.08
PCDHA11-201ENST00000398640 EML1O00423 815 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 WBP4O75554 376 aaKnown RBP14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 NUDT14O95848 222 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 KCNA3P22001 575 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 FNTAP49354 379 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 THOP1P52888 689 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 BBS2Q9BXC9 721 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 RMND5AQ9H871 391 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 AASDHPPTQ9NRN7 309 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 DCDC2Q9UHG0 476 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 GIT1Q9Y2X7 761 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 NR5A2O00482 541 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 PEX10O60683 326 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 KATNA1O75449 491 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 ALBP02768 609 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 TPH1P17752 444 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 COPAP53621 1224 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 DSG4Q86SJ6 1040 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 SEMA6BQ9H3T3 888 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 RIPK3Q9Y572 518 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 RRM1P23921 792 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 HSD17B3P37058 310 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 VEGFBP49765 207 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 HLA-DQA1Q5Y7H0 255 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 CAPRIN2Q6IMN6 1127 aaKnown RBP14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 ALKBH2Q6NS38 261 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 ZNF296Q8WUU4 475 aaPredicted RBP14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 CCT7Q99832 543 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 PALMDQ9NP74 551 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 GLRA3O75311 464 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 ZNF682O95780 498 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 SMPD1P17405 629 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 TUBP50607 506 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 MTA1Q13330 715 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 ARHGAP17Q68EM7 881 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 FBXL19Q6PCT2 694 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 RHBGQ9H310 441 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 FRMPD4Q14CM0 1322 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 TRAV19A0A0A6YYK7 116 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 CCNT2O60583 730 aaKnown RBP14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 USP1O94782 785 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 SLC10A3P09131 477 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 LSP1P33241 339 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 TGM3Q08188 693 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 POU6F1Q14863 301 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 TMEM154Q6P9G4 183 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 FGD2Q7Z6J4 655 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 RIBC1Q8N443 379 aaPredicted RBP14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 C12orf42Q96LP6 360 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 WDR41Q9HAD4 459 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 TRPC4Q9UBN4 977 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 PTCH2Q9Y6C5 1203 aa14.57□□□□□ -0.08
PCDHA11-201ENST00000398640 M0R3G1 203 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 RAMP2O60895 175 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 MT-CO1P00395 513 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 SYN1P17600 705 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 CYP2F1P24903 491 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 CBWD3Q5JTY5 395 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 CBWD5Q5RIA9 395 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 MICU2Q8IYU8 434 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 ARNTL2Q8WYA1 636 aa14.56□□□□□ -0.08
PCDHA11-201ENST00000398640 LENG1Q96BZ8 264 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms