RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SDR42E1Q8WUS8 393 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PLD4Q96BZ4 506 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 MIEF2Q96C03 454 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 MSANTD3Q96H12 275 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SEPT5Q99719 369 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 CHCHD6Q9BRQ6 235 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SHCBP1LQ9BZQ2 653 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 YIPF3Q9GZM5 350 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 BHMT2Q9H2M3 363 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 NRDE2Q9H7Z3 1164 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 LRRC4BQ9NT99 713 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SRP68Q9UHB9 627 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 SORCS3Q9UPU3 1222 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 HCN4Q9Y3Q4 1203 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 MYLKQ15746 1914 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 A0A0B4J269 797 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SMIM23A6NLE4 172 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ENO2P09104 434 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 RHOXF2BP0C7M4 288 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ESRRAP11474 423 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 ACO1P21399 889 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 CLNS1AP54105 237 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 CSE1LP55060 971 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 TBX2Q13207 712 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 TUBB3Q13509 450 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 BTG3Q14201 252 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 FBXO47Q5MNV8 452 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 FAM91A1Q658Y4 838 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 IL31Q6EBC2 164 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 LYSMD3Q7Z3D4 306 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SAMD7Q7Z3H4 446 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 P4HA3Q7Z4N8 544 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 GPR135Q8IZ08 494 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 AHI1Q8N157 1196 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 FIBCD1Q8N539 461 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 CAMKK1Q8N5S9 505 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TM9SF4Q92544 642 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 MAGOHBQ96A72 148 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 C18orf25Q96B23 403 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 ZNF558Q96NG5 402 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 APOL4Q9BPW4 351 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 RHOXF2Q9BQY4 288 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PDCD10Q9BUL8 212 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ABCG4Q9H172 646 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 CAAP1Q9H8G2 361 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SEMA3GQ9NS98 782 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 NXF1Q9UBU9 619 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 FBXL5Q9UKA1 691 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 CFL2Q9Y281 166 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 NLRC5Q86WI3 1866 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PRAMEF22A3QJZ6 481 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 EIF3HO15372 352 aaKnown RBP eCLIP2.79□□□□□ -1.962e-6■■■■■ 27
CHD9-202ENST00000398510 TRPA1O75762 1119 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 YY1P25490 414 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 CLCN1P35523 988 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PCYT1AP49585 367 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 FXR2P51116 673 aaKnown RBP eCLIP2.79□□□□□ -1.961e-6■■■■□ 20.1
CHD9-202ENST00000398510 SNAP25P60880 206 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ACTR2P61160 394 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 RASGEF1BQ0VAM2 473 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 GRIK3Q13003 919 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SEC23BQ15437 767 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 DPY19L1Q2PZI1 675 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SPDYCQ5MJ68 293 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ZFP1Q6P2D0 407 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ARL9Q6T311 187 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TMC5Q6UXY8 1006 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 DDIASQ8IXT1 998 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 COLGALT2Q8IYK4 626 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ADGRF2Q8IZF7 708 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 HORMAD2Q8N7B1 307 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 CFAP61Q8NHU2 1237 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 NR4A3Q92570 626 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 GPKOWQ92917 476 aaPredicted RBP eCLIP2.79□□□□□ -1.962e-8■■■■■ 29.1
CHD9-202ENST00000398510 ZNF607Q96SK3 696 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 DBNDD2Q9BQY9 259 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 KIAA1683Q9H0B3 1180 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 GREM2Q9H772 168 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 RRAGDQ9NQL2 400 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 SDHAF3Q9NRP4 125 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 MTRRQ9UBK8 725 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PPP2R2CQ9Y2T4 447 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 BRWD3Q6RI45 1802 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 KIAA0100Q14667 2235 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 GJE1A6NN92 205 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CENPXA8MT69 81 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 KRT33AO76009 404 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MT-ND5P03915 603 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ZNF3P17036 446 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PEX3P56589 373 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TAS2R50P59544 299 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 NME3Q13232 169 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 EPHA7Q15375 998 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 FAM110CQ1W6H9 321 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 NDUFAF6Q330K2 333 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 BBS9Q3SYG4 887 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 WDR45BQ5MNZ6 344 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ALKBH5Q6P6C2 394 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 HSDL2Q6YN16 418 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CYFIP1Q7L576 1253 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms