RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 EIF2S3P41091 472 aaKnown RBP16.79■□□□□ 0.28
CUX2-202ENST00000397643 BCAT1P54687 386 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 RACK1P63244 317 aaKnown RBP16.79■□□□□ 0.28
CUX2-202ENST00000397643 KMT5BQ4FZB7 885 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 ARHGAP17Q68EM7 881 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 PM20D1Q6GTS8 502 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 GATAD2AQ86YP4 633 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 FMNL3Q8IVF7 1028 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 SLC4A11Q8NBS3 891 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 SLC39A7Q92504 469 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 NXPE2Q96DL1 559 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 PAGE5Q96GU1 130 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 MYO19Q96H55 970 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 HEXIM2Q96MH2 286 aaKnown RBP16.79■□□□□ 0.28
CUX2-202ENST00000397643 SLC6A18Q96N87 628 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 ULBP1Q9BZM6 244 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 MTG2Q9H4K7 406 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 EBF2Q9HAK2 575 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 EXOC1Q9NV70 894 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 SERGEFQ9UGK8 458 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 PLA2G4CQ9UP65 541 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 FRMD4BQ9Y2L6 1034 aa16.79■□□□□ 0.28
CUX2-202ENST00000397643 TK2O00142 265 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 TULP2O00295 520 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 ENC1O14682 589 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 DFNA5O60443 496 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 ZBED1O96006 694 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 DNTTP04053 509 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 DLDP09622 509 aaKnown RBP16.78■□□□□ 0.28
CUX2-202ENST00000397643 TKTL1P51854 596 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 RAD23BP54727 409 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 C19orf57Q0VDD7 668 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 INAVAQ3KP66 663 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 TTC31Q49AM3 519 aaPredicted RBP16.78■□□□□ 0.28
CUX2-202ENST00000397643 PRAMEF14Q5SWL7 426 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 MBLAC2Q68D91 279 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 ZNF776Q68DI1 518 aaPredicted RBP16.78■□□□□ 0.28
CUX2-202ENST00000397643 KIAA0895LQ68EN5 471 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 AHI1Q8N157 1196 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 LMLNQ96KR4 655 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 ELF4Q99607 663 aaPredicted RBP16.78■□□□□ 0.28
CUX2-202ENST00000397643 RSPH9Q9H1X1 276 aaPredicted RBP16.78■□□□□ 0.28
CUX2-202ENST00000397643 TRAF3IP3Q9Y228 551 aa16.78■□□□□ 0.28
CUX2-202ENST00000397643 HBS1LQ9Y450 684 aaKnown RBP16.78■□□□□ 0.28
CUX2-202ENST00000397643 ARID1BQ8NFD5 2236 aaPredicted RBP16.78■□□□□ 0.28
CUX2-202ENST00000397643 MGAQ8IWI9 3026 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 TENM4Q6N022 2769 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 A0A1W2PPC4 97 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 LATS1O95835 1130 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 MYL1P05976 194 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 CD70P32970 193 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 HARS2P49590 506 aaKnown RBP16.77■□□□□ 0.28
CUX2-202ENST00000397643 ACADVLP49748 655 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 ZNF445P59923 1031 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 DNAJC3Q13217 504 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 ADGRF1Q5T601 910 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 USP30Q70CQ3 517 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 ADAT2Q7Z6V5 191 aaKnown RBP16.77■□□□□ 0.28
CUX2-202ENST00000397643 ANKRD52Q8NB46 1076 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 GPT2Q8TD30 523 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 SAP25Q8TEE9 199 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 GOLGA1Q92805 767 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 SEMA4DQ92854 862 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 TMA16Q96EY4 203 aaKnown RBP16.77■□□□□ 0.28
CUX2-202ENST00000397643 TMEM176AQ96HP8 235 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 ACE2Q9BYF1 805 aaPredicted RBP16.77■□□□□ 0.28
CUX2-202ENST00000397643 PABPC3Q9H361 631 aaKnown RBP16.77■□□□□ 0.28
CUX2-202ENST00000397643 CISHQ9NSE2 258 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 SFMBT1Q9UHJ3 866 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 RAI2Q9Y5P3 530 aa16.77■□□□□ 0.28
CUX2-202ENST00000397643 MSI1O43347 362 aaKnown RBP16.76■□□□□ 0.27
CUX2-202ENST00000397643 RFPL3O75679 317 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 GALCP54803 685 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 MCCD1P59942 119 aaPredicted RBP16.76■□□□□ 0.27
CUX2-202ENST00000397643 ENPEPQ07075 957 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 KCNJ12Q14500 433 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 RTP5Q14D33 572 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 NFIL3Q16649 462 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 FBXL19Q6PCT2 694 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 INTS8Q75QN2 995 aaKnown RBP16.76■□□□□ 0.27
CUX2-202ENST00000397643 ELOA2Q8IYF1 753 aaPredicted RBP16.76■□□□□ 0.27
CUX2-202ENST00000397643 TSC1Q92574 1164 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 CNDP2Q96KP4 475 aaKnown RBP16.76■□□□□ 0.27
CUX2-202ENST00000397643 MMRN2Q9H8L6 949 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 TMEM8AQ9HCN3 771 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 OLA1Q9NTK5 396 aaKnown RBP16.76■□□□□ 0.27
CUX2-202ENST00000397643 MYLKQ15746 1914 aa16.76■□□□□ 0.27
CUX2-202ENST00000397643 MAST4O15021 2626 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 A0A1W2PR77 199 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 YJEFN3A6XGL0 299 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 E7ENQ6 273 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 WNT9AO14904 365 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 CALUO43852 315 aaPredicted RBP16.75■□□□□ 0.27
CUX2-202ENST00000397643 LDOC1O95751 146 aaPredicted RBP16.75■□□□□ 0.27
CUX2-202ENST00000397643 C1SP09871 688 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 JUPP14923 745 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 NR2F2P24468 414 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 HNF1BP35680 557 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 C21orf59P57076 290 aa16.75■□□□□ 0.27
CUX2-202ENST00000397643 SEMG2Q02383 582 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms