RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 EXOC3L1Q86VI1 746 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 EFHBQ8N7U6 833 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TSPEARQ8WU66 669 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TBC1D31Q96DN5 1066 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 STAMBPL1Q96FJ0 436 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 GAD1Q99259 594 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 SLC25A51Q9H1U9 297 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 POPDC3Q9HBV1 291 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ARHGEF38Q9NXL2 777 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 MTRRQ9UBK8 725 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ZC3H7BQ9UGR2 993 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CPA4Q9UI42 421 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PCDHB5Q9Y5E4 795 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CSH1P0DML2 217 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CSH2P0DML3 217 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PGAM1P18669 254 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 KCNT2Q6UVM3 1135 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 FAM183BPQ6ZVS7 135 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 FAM149B1Q96BN6 582 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 FAM167BQ9BTA0 163 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 GOLGA8CPA6NN73 597 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TNFRSF10BO14763 440 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 MAGEA12P43365 314 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CCDC153Q494R4 210 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TMEM63BQ5T3F8 832 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 DSTYKQ6XUX3 929 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 MOB2Q70IA6 237 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 KDM1BQ8NB78 822 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TRIM7Q9C029 511 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 DPH5Q9H2P9 285 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TRABDQ9H4I3 376 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 POLD4Q9HCU8 107 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 BCAP29Q9UHQ4 241 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 IPO11Q9UI26 975 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 COMMD10Q9Y6G5 202 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 FAM169AQ9Y6X4 670 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 KIAA1671Q9BY89 1806 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 GRXCR2A6NFK2 248 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TFRCP02786 760 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 IL1R2P27930 398 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 WEE1P30291 646 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ETV4P43268 484 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 SUOXP51687 545 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 GUCY2FP51841 1108 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CAP1Q01518 475 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 SLC7A5Q01650 507 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ACVR1Q04771 509 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 YWHAHQ04917 246 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PRPSAP1Q14558 356 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 KRT72Q14CN4 511 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TRIP4Q15650 581 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PDPK2PQ6A1A2 396 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 SUGP1Q8IWZ8 645 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PARP9Q8IXQ6 854 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 NEUROG2Q9H2A3 272 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 RHOJQ9H4E5 214 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 OGDHLQ9ULD0 1010 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 NAALADL1Q9UQQ1 740 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TMEM120BA0PK00 339 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CCDC22O60826 627 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 USP1O94782 785 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 IGLV3-27P01718 113 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 VTNP04004 478 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PAMP19021 973 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CYP2F1P24903 491 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 BSPRYQ5W0U4 402 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 LMBRD2Q68DH5 695 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 EFL1Q7Z2Z2 1120 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ZMIZ2Q8NF64 920 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 NSMCE1Q8WV22 266 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ACDQ96AP0 544 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 KIFC1Q9BW19 673 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 MTIF3Q9H2K0 278 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PAK6Q9NQU5 681 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 KCNK4Q9NYG8 393 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TXNDC16Q9P2K2 825 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 NOVA2Q9UNW9 492 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 LZTS1Q9Y250 596 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 STK38LQ9Y2H1 464 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 MTO1Q9Y2Z2 717 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 SGK1O00141 431 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 EDF1O60869 148 aaKnown RBP6.03□□□□□ -1.44
PTPRD-206ENST00000397617 FKTNO75072 461 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 GLRA3O75311 464 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 FGF1P05230 155 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 IFT88Q13099 833 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 FAXCQ5TGI0 409 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CCDC121Q6ZUS5 278 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 ABI1Q8IZP0 508 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 PLCD3Q8N3E9 789 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 JOSD2Q8TAC2 188 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 TMEM40Q8WWA1 233 aa6.03□□□□□ -1.44
PTPRD-206ENST00000397617 CCT8L1PA6NM43 557 aa6.02□□□□□ -1.45
PTPRD-206ENST00000397617 ERCC2P18074 760 aa6.02□□□□□ -1.45
PTPRD-206ENST00000397617 CYP2B6P20813 491 aa6.02□□□□□ -1.45
PTPRD-206ENST00000397617 SLC8A1P32418 973 aa6.02□□□□□ -1.45
PTPRD-206ENST00000397617 DGKZQ13574 1117 aa6.02□□□□□ -1.45
PTPRD-206ENST00000397617 PAQR9Q6ZVX9 377 aa6.02□□□□□ -1.45
PTPRD-206ENST00000397617 AGGF1Q8N302 714 aaeCLIP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms