RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MAATS1Q7Z4T9 603 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 CCDC105Q8IYK2 499 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 C12orf76Q8N812 135 aaPredicted RBP28.38■■■□□ 2.13
CPNE1-203ENST00000397442 LEMD2Q8NC56 503 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 RUNDC3BQ96NL0 473 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 SLC46A2Q9BY10 475 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 SMPD4Q9NXE4 827 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 HEY1Q9Y5J3 304 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 TARSL2A2RTX5 802 aaKnown RBP28.38■■■□□ 2.13
CPNE1-203ENST00000397442 E9PAM4 449 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 DAPK3O43293 454 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 HTR7P34969 479 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 AUHQ13825 339 aaKnown RBP28.38■■■□□ 2.13
CPNE1-203ENST00000397442 CCDC70Q6NSX1 233 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 GRASPQ7Z6J2 395 aaPredicted RBP28.38■■■□□ 2.13
CPNE1-203ENST00000397442 HINFPQ9BQA5 517 aa28.38■■■□□ 2.13
CPNE1-203ENST00000397442 GLP2RO95838 553 aa28.37■■■□□ 2.13
CPNE1-203ENST00000397442 SLC7A9P82251 487 aa28.37■■■□□ 2.13
CPNE1-203ENST00000397442 MTA1Q13330 715 aa28.37■■■□□ 2.13
CPNE1-203ENST00000397442 PAFAH1B3Q15102 231 aaKnown RBP28.37■■■□□ 2.13
CPNE1-203ENST00000397442 JAMLQ86YT9 394 aa28.37■■■□□ 2.13
CPNE1-203ENST00000397442 ATL2Q8NHH9 583 aa28.37■■■□□ 2.13
CPNE1-203ENST00000397442 NSUN3Q9H649 340 aaKnown RBP28.37■■■□□ 2.13
CPNE1-203ENST00000397442 DTLQ9NZJ0 730 aa28.37■■■□□ 2.13
CPNE1-203ENST00000397442 STIM2Q9P246 746 aa28.37■■■□□ 2.13
CPNE1-203ENST00000397442 DRG1Q9Y295 367 aaKnown RBP28.37■■■□□ 2.13
CPNE1-203ENST00000397442 ZSCAN5CA6NGD5 496 aaPredicted RBP28.36■■■□□ 2.13
CPNE1-203ENST00000397442 SPDYE4A6NLX3 237 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 BHMG1C9JSJ3 638 aaPredicted RBP28.36■■■□□ 2.13
CPNE1-203ENST00000397442 MFSD11O43934 449 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 PFKLP17858 780 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 HARS2P49590 506 aaKnown RBP28.36■■■□□ 2.13
CPNE1-203ENST00000397442 HYAL1Q12794 435 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 RAP1GAP2Q684P5 730 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 PPP2R3CQ969Q6 453 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 AZIN2Q96A70 460 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 TBC1D31Q96DN5 1066 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 PARD6BQ9BYG5 372 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 IGFLR1Q9H665 355 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 CPQQ9Y646 472 aa28.36■■■□□ 2.13
CPNE1-203ENST00000397442 IGLV3-10A0A075B6K4 115 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 ACSL4O60488 711 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 GREM1O60565 184 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 HEXIM1O94992 359 aaKnown RBP28.35■■■□□ 2.13
CPNE1-203ENST00000397442 MAP3K6O95382 1288 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 ITGAVP06756 1048 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 NR2C2P49116 596 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 EIF3EP60228 445 aaKnown RBP28.35■■■□□ 2.13
CPNE1-203ENST00000397442 TEAD2Q15562 447 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 FAM133BQ5BKY9 247 aaKnown RBP28.35■■■□□ 2.13
CPNE1-203ENST00000397442 TCEAL5Q5H9L2 206 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 ACBD5Q5T8D3 534 aaPredicted RBP28.35■■■□□ 2.13
CPNE1-203ENST00000397442 RWDD4Q6NW29 188 aaKnown RBP28.35■■■□□ 2.13
CPNE1-203ENST00000397442 DENND1CQ8IV53 801 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 TRIM51Q9BSJ1 452 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 SFXN1Q9H9B4 322 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 VANGL2Q9ULK5 521 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 NEU2Q9Y3R4 380 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 DOCK4Q8N1I0 1966 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 TRAV19A0A0A6YYK7 116 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 GOLGA6L7A0A1B0GV03 622 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 FAM187AA6NFU0 413 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 IRF1P10914 325 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 CORO1AP31146 461 aaKnown RBP28.35■■■□□ 2.13
CPNE1-203ENST00000397442 FBXL22Q6P050 247 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 TMCO3Q6UWJ1 677 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 TMC5Q6UXY8 1006 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 TMEM184AQ6ZMB5 413 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 NPWQ8N729 165 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 SMG7Q92540 1137 aaKnown RBP28.35■■■□□ 2.13
CPNE1-203ENST00000397442 MYEOVQ96EZ4 313 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 OLFM3Q96PB7 478 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 C10orf88Q9H8K7 445 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 REV3LO60673 3130 aa28.35■■■□□ 2.13
CPNE1-203ENST00000397442 C2orf16Q68DN1 1984 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 A0A1W2PPC1 479 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 MCF2LO15068 1137 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 ECEL1O95672 775 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 CKMP06732 381 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 RBP3P10745 1247 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 SLC6A4P31645 630 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 HELZP42694 1942 aaKnown RBP28.34■■■□□ 2.13
CPNE1-203ENST00000397442 IRAK1P51617 712 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 GPR158Q5T848 1215 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 ZC3H18Q86VM9 953 aaKnown RBP28.34■■■□□ 2.13
CPNE1-203ENST00000397442 IGSF8Q969P0 613 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 CCDC114Q96M63 670 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 TMEM121Q9BTD3 319 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 KLC2Q9H0B6 622 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 DZANK1Q9NVP4 752 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 PPARGC1AQ9UBK2 798 aaKnown RBP28.34■■■□□ 2.13
CPNE1-203ENST00000397442 AGO1Q9UL18 857 aaKnown RBP28.34■■■□□ 2.13
CPNE1-203ENST00000397442 ZNF148Q9UQR1 794 aa28.34■■■□□ 2.13
CPNE1-203ENST00000397442 CLUHO75153 1309 aa28.33■■■□□ 2.13
CPNE1-203ENST00000397442 FGF10O15520 208 aaPredicted RBP28.33■■■□□ 2.13
CPNE1-203ENST00000397442 DDX6P26196 483 aaKnown RBP eCLIP28.33■■■□□ 2.139e-13■■■■□ 20.8
CPNE1-203ENST00000397442 SLC11A2P49281 568 aa28.33■■■□□ 2.13
CPNE1-203ENST00000397442 POTEHQ6S545 545 aa28.33■■■□□ 2.13
CPNE1-203ENST00000397442 TP53INP2Q8IXH6 220 aa28.33■■■□□ 2.13
CPNE1-203ENST00000397442 EFHBQ8N7U6 833 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms