RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CLEC20AQ6ZU45 233 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 GPRIN1Q7Z2K8 1008 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 TADA2BQ86TJ2 420 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 UNC93AQ86WB7 457 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 C12orf56Q8IXR9 622 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CPXM2Q8N436 756 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CLEC18CQ8NCF0 446 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CDK5RAP1Q96SZ6 601 aaKnown RBP9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CIPCQ9C0C6 399 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 LRRC27Q9C0I9 530 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 TNMDQ9H2S6 317 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 FBRSQ9HAH7 460 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 KBTBD4Q9NVX7 518 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CLIC5Q9NZA1 410 aa9.86□□□□□ -0.83
NEDD9-203ENST00000397378 CGNQ9P2M7 1197 aaKnown RBP9.86□□□□□ -0.83
NEDD9-203ENST00000397378 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.86□□□□□ -0.83
NEDD9-203ENST00000397378 NYNRINQ9P2P1 1898 aaKnown RBP9.85□□□□□ -0.83
NEDD9-203ENST00000397378 A0A1W2PPC4 97 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 CYBBP04839 570 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 IGHV4-34P06331 123 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 P4HA1P13674 534 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 CORO1AP31146 461 aaKnown RBP9.85□□□□□ -0.83
NEDD9-203ENST00000397378 KIF11P52732 1056 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 NDST1P52848 882 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 ZBTB16Q05516 673 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 PDE4CQ08493 712 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 CLN3Q13286 438 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 BIRC3Q13489 604 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 NCOA4Q13772 614 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 IGFBP7Q16270 282 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 PROX2Q3B8N5 592 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 TTC31Q49AM3 519 aaPredicted RBP9.85□□□□□ -0.83
NEDD9-203ENST00000397378 HS1BP3Q53T59 392 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 FAM26FQ5R3K3 315 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 TMEM215Q68D42 235 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 CNNM4Q6P4Q7 775 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 FOXR1Q6PIV2 292 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 SCARA5Q6ZMJ2 495 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 CCDC186Q7Z3E2 898 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 SCD5Q86SK9 330 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 C12orf29Q8N999 325 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 PLEKHO2Q8TD55 490 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 PARD3BQ8TEW8 1205 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 PANK2Q9BZ23 570 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 EPN3Q9H201 632 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 TMEM245Q9H330 911 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 SGK2Q9HBY8 427 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 FAM49BQ9NUQ9 324 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 PLEKHB1Q9UF11 243 aaPredicted RBP9.85□□□□□ -0.83
NEDD9-203ENST00000397378 HMGXB4Q9UGU5 601 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 NUDT5Q9UKK9 219 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 DOCK9Q9BZ29 2069 aa9.85□□□□□ -0.83
NEDD9-203ENST00000397378 UTP20O75691 2785 aaKnown RBP9.85□□□□□ -0.83
NEDD9-203ENST00000397378 ABCA12Q86UK0 2595 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 SIGLEC6O43699 453 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 STX6O43752 255 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 OPA1O60313 960 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 SDC3O75056 442 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 CD2BP2O95400 341 aaKnown RBP9.84□□□□□ -0.83
NEDD9-203ENST00000397378 VNN1O95497 513 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 C4BPAP04003 597 aaKnown RBP9.84□□□□□ -0.83
NEDD9-203ENST00000397378 ITGB2P05107 769 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 RALAP11233 206 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 TRIM21P19474 475 aaKnown RBP9.84□□□□□ -0.83
NEDD9-203ENST00000397378 CASP4P49662 377 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 ASIC1P78348 528 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 SKOR1P84550 965 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 FOXK1P85037 733 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 AMPD3Q01432 767 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 EHHADHQ08426 723 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 SGSM1Q2NKQ1 1148 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 CDCP2Q5VXM1 449 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 PTRH1Q86Y79 214 aaKnown RBP9.84□□□□□ -0.83
NEDD9-203ENST00000397378 FAM217AQ8IXS0 508 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 OXR1Q8N573 874 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 GANCQ8TET4 914 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 SORCS1Q8WY21 1168 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 TAF4BQ92750 862 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 SGF29Q96ES7 293 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 SLC46A1Q96NT5 459 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 SEMA3CQ99985 751 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 ABCG4Q9H172 646 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 OSBPL2Q9H1P3 480 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 CUEDC2Q9H467 287 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
NEDD9-203ENST00000397378 NAGPAQ9UK23 515 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 AGO1Q9UL18 857 aaKnown RBP9.84□□□□□ -0.83
NEDD9-203ENST00000397378 CLEC4EQ9ULY5 219 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 USP3Q9Y6I4 520 aa9.84□□□□□ -0.83
NEDD9-203ENST00000397378 USP9YO00507 2555 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-203ENST00000397378 TDRD6O60522 2096 aaKnown RBP9.83□□□□□ -0.84
NEDD9-203ENST00000397378 VPS37CA5D8V6 355 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-203ENST00000397378 LRRIQ3A6PVS8 624 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-203ENST00000397378 EXOC3O60645 756 aa9.83□□□□□ -0.84
NEDD9-203ENST00000397378 CLSTN1O94985 981 aa9.83□□□□□ -0.84
NEDD9-203ENST00000397378 GJB6O95452 261 aa9.83□□□□□ -0.84
NEDD9-203ENST00000397378 RPN1P04843 607 aaKnown RBP9.83□□□□□ -0.84
NEDD9-203ENST00000397378 ADORA2BP29275 332 aa9.83□□□□□ -0.84
NEDD9-203ENST00000397378 RXRGP48443 463 aa9.83□□□□□ -0.84
NEDD9-203ENST00000397378 NXPH1P58417 271 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms