RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RAB41Q5JT25 222 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 PPP1R26Q5T8A7 1209 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-208ENST00000397204 PM20D1Q6GTS8 502 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 DENND1CQ8IV53 801 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 GRAMD1CQ8IYS0 662 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 RBBP8NLQ8NC74 664 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-208ENST00000397204 TAS1R2Q8TE23 839 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 DDI1Q8WTU0 396 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 CIPCQ9C0C6 399 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 NIF3L1Q9GZT8 377 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 APOBEC3GQ9HC16 384 aaKnown RBP9.16□□□□□ -0.94
CAPN3-208ENST00000397204 OSGEPQ9NPF4 335 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 MARCH2Q9P0N8 246 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 RASAL2Q9UJF2 1139 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 PLA2G4CQ9UP65 541 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 KALRNO60229 2985 aa9.16□□□□□ -0.94
CAPN3-208ENST00000397204 SETXQ7Z333 2677 aaKnown RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 HMBSP08397 361 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 ZSCAN22P10073 491 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 KRT13P13646 458 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 TIMP2P16035 220 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 CD58P19256 250 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 CMA1P23946 247 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 RPL13P26373 211 aaKnown RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 HARS2P49590 506 aaKnown RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 CSNK1EP49674 416 aaKnown RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 ZNF445P59923 1031 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 YWHAGP61981 247 aaKnown RBP eCLIP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 ZBTB16Q05516 673 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 PPP3CAQ08209 521 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 CAMK2GQ13555 558 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 TEAD4Q15561 434 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 TMEM215Q68D42 235 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 C19orf48Q6RUI8 117 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 SERPINA13PQ6UXR4 307 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 RSRC2Q7L4I2 434 aaKnown RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 PDZD3Q86UT5 571 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 PIGZQ86VD9 579 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 FAM217AQ8IXS0 508 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 GALNT15Q8N3T1 639 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 ANKRD52Q8NB46 1076 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 OR2T3Q8NH03 318 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 BAHD1Q8TBE0 780 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 ADAM32Q8TC27 787 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 CCDC47Q96A33 483 aaKnown RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 PLD4Q96BZ4 506 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 TMA16Q96EY4 203 aaKnown RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 FBRSQ9HAH7 460 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 IL21RQ9HBE5 538 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 OLA1Q9NTK5 396 aaKnown RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 SUN2Q9UH99 717 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 CLEC4EQ9ULY5 219 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 ANKRD6Q9Y2G4 727 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 HBS1LQ9Y450 684 aaKnown RBP9.15□□□□□ -0.94
CAPN3-208ENST00000397204 MAP4K5Q9Y4K4 846 aa9.15□□□□□ -0.94
CAPN3-208ENST00000397204 ADAMTS9Q9P2N4 1935 aa9.15□□□□□ -0.95
CAPN3-208ENST00000397204 BPTFQ12830 3046 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 CEP192Q8TEP8 1941 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 A0A1B0GVT2 93 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 SLC12A8A0AV02 714 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 PCDHGA12O60330 932 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 DFNA5O60443 496 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 LATS1O95835 1130 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 ZBED1O96006 694 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 F13A1P00488 732 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 CENPBP07199 599 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 ATXN1LP0C7T5 689 aaKnown RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 NR2F2P24468 414 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 PRKCHP24723 683 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 SFSWAPQ12872 951 aaKnown RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 ADAM9Q13443 819 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 TRIP4Q15650 581 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 COL28A1Q2UY09 1125 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 FOXD4L6Q3SYB3 417 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 ZNF394Q53GI3 561 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 SOWAHCQ53LP3 525 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 ADGRF1Q5T601 910 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 FOXD4L5Q5VV16 416 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 ARHGAP17Q68EM7 881 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 KRT39Q6A163 491 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 FOXD4L3Q6VB84 417 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 KIAA0907Q7Z7F0 614 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 FAM186BQ8IYM0 893 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 SLC4A11Q8NBS3 891 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 ENGASEQ8NFI3 743 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 MDM1Q8TC05 714 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 WFIKKN2Q8TEU8 576 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 FOXD4L4Q8WXT5 416 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 SORCS1Q8WY21 1168 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 TMEM176AQ96HP8 235 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 BTBD1Q9H0C5 482 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 LHX5Q9H2C1 402 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 TMEM245Q9H330 911 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 TMEM8AQ9HCN3 771 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 CISHQ9NSE2 258 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 RAB20Q9NX57 234 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 STOML2Q9UJZ1 356 aa9.14□□□□□ -0.95
CAPN3-208ENST00000397204 FNDC3AQ9Y2H6 1198 aaKnown RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-208ENST00000397204 TRABD2BA6NFA1 517 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms