RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 RAP1GAPP47736 663 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 THOP1P52888 689 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
SMU1-201ENST00000397149 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 REXO1L1PQ8IX06 675 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ZNF366Q8N895 744 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ING5Q8WYH8 240 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 GLT1D1Q96MS3 346 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 AP4E1Q9UPM8 1137 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 GPSM3Q9Y4H4 160 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ULK1O75385 1050 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ITPKBP27987 946 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ZNHIT3Q15649 155 aaPredicted RBP12.59□□□□□ -0.39
SMU1-201ENST00000397149 RFX4Q33E94 735 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 NOTUMQ6P988 496 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ATG10Q9H0Y0 220 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 DSEQ9UL01 958 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 AXIN2Q9Y2T1 843 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 PVALEFA0A1B0GWK0 134 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 H7C4K7 107 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 FARP2O94887 1054 aaPredicted RBP12.59□□□□□ -0.39
SMU1-201ENST00000397149 STAG3L1P0CL83 205 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 TAF6P49848 677 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 STK4Q13043 487 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 INSCQ1MX18 579 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ILDR2Q71H61 639 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 CPB2Q96IY4 423 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 CELF6Q96J87 481 aaKnown RBP12.59□□□□□ -0.39
SMU1-201ENST00000397149 MYOCQ99972 504 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 SYT15Q9BQS2 421 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 RBM12Q9NTZ6 932 aaKnown RBP12.59□□□□□ -0.39
SMU1-201ENST00000397149 RAD54BQ9Y620 910 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 KANSL1LA0AUZ9 987 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 CLOCKO15516 846 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 PPM1AP35813 382 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
SMU1-201ENST00000397149 PDX1P52945 283 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 PTPN5P54829 565 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 KCNV1Q6PIU1 500 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 ZNF248Q8NDW4 579 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 JSRP1Q96MG2 331 aaPredicted RBP12.59□□□□□ -0.39
SMU1-201ENST00000397149 FANCAO15360 1455 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 KCNA10Q16322 511 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 MILR1Q7Z6M3 343 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 FBXO36Q8NEA4 188 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 FBXO30Q8TB52 745 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 FEZF2Q8TBJ5 459 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 PGLYRP2Q96PD5 576 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 GGA2Q9UJY4 613 aa12.59□□□□□ -0.39
SMU1-201ENST00000397149 PARD3Q8TEW0 1356 aa12.58□□□□□ -0.39
SMU1-201ENST00000397149 CASTOR2A6NHX0 329 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 PRMT3O60678 531 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 CCNB2O95067 398 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 DBTP11182 482 aaKnown RBP12.58□□□□□ -0.4
SMU1-201ENST00000397149 CHN2P52757 468 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 RAP1GAP2Q684P5 730 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 KIAA1324Q6UXG2 1013 aaKnown RBP12.58□□□□□ -0.4
SMU1-201ENST00000397149 HERC6Q8IVU3 1022 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 TBATAQ96M53 351 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 VPS35Q96QK1 796 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 OMDQ99983 421 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 CBWD1Q9BRT8 395 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 ABCG4Q9H172 646 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 LCA5LO95447 670 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 FMO5P49326 533 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 PLK1P53350 603 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 PRKCEQ02156 737 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 DCTN2Q13561 401 aaKnown RBP12.58□□□□□ -0.4
SMU1-201ENST00000397149 SYT12Q8IV01 421 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 ATG4AQ8WYN0 398 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 CCDC126Q96EE4 140 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 ANKDD1BA6NHY2 528 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 UBDO15205 165 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 PGK1P00558 417 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 JCHAINP01591 159 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 BGNP21810 368 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 ATXN1P54253 815 aaKnown RBP12.58□□□□□ -0.4
SMU1-201ENST00000397149 BNC1Q01954 994 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 EPS8L3Q8TE67 593 aaKnown RBP12.58□□□□□ -0.4
SMU1-201ENST00000397149 C7orf25Q9BPX7 421 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 C17orf102A2RUQ5 167 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 ZNF208O43345 1280 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 HSF2Q03933 536 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 LRRC34Q8IZ02 419 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 TMEM132CQ8N3T6 1108 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 RFT1Q96AA3 541 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 IDI2Q9BXS1 227 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 MID1IP1Q9NPA3 183 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 METTL21CQ5VZV1 264 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 MTDHQ86UE4 582 aaKnown RBP12.58□□□□□ -0.4
SMU1-201ENST00000397149 TBC1D10CQ8IV04 446 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 MCEMP1Q8IX19 187 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 BPIFB6Q8NFQ5 453 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 OSCP1Q8WVF1 389 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 WDR24Q96S15 920 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 THG1LQ9NWX6 298 aaKnown RBP12.58□□□□□ -0.4
SMU1-201ENST00000397149 USP18Q9UMW8 372 aa12.58□□□□□ -0.4
SMU1-201ENST00000397149 SNX12Q9UMY4 172 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms