RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 NR1H3Q13133 447 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 DGCR6Q14129 220 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 SLC9A4Q6AI14 798 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 RALGPS2Q86X27 583 aaPredicted RBP8.64□□□□□ -1.03
NDE1-202ENST00000396355 PASD1Q8IV76 773 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 CPXCR1Q8N123 301 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 NPLOC4Q8TAT6 608 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 ACTRT1Q8TDG2 376 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 UPF3AQ9H1J1 476 aaKnown RBP8.64□□□□□ -1.03
NDE1-202ENST00000396355 S100A14Q9HCY8 104 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 SNTG2Q9NY99 539 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 GCNT4Q9P109 453 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 ZNF70Q9UC06 446 aaPredicted RBP8.64□□□□□ -1.03
NDE1-202ENST00000396355 STARD13Q9Y3M8 1113 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 PTCH2Q9Y6C5 1203 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 ILVBLA1L0T0 632 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 H0Y626 953 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 I3L521 148 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 MEIS2O14770 477 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 SLC9A1P19634 815 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 RPL35P42766 123 aaKnown RBP8.64□□□□□ -1.03
NDE1-202ENST00000396355 CLK1P49759 484 aaKnown RBP8.64□□□□□ -1.03
NDE1-202ENST00000396355 SLC12A3P55017 1021 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 QRICH1Q2TAL8 776 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 PPP1R18Q6NYC8 613 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 GJB7Q6PEY0 223 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 SIAH1Q8IUQ4 282 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 RIN3Q8TB24 985 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 LENG9Q96B70 501 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 NACC2Q96BF6 587 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 SNF8Q96H20 258 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 HAPLN3Q96S86 360 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 COPS4Q9BT78 406 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 IKZF4Q9H2S9 585 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 SMARCAD1Q9H4L7 1026 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 AJAP1Q9UKB5 411 aaPredicted RBP8.64□□□□□ -1.03
NDE1-202ENST00000396355 BOLA1Q9Y3E2 137 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 SCN4AP35499 1836 aa8.64□□□□□ -1.03
NDE1-202ENST00000396355 SSU72P8A0A1W2PR75 194 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 TTC34A8MYJ7 566 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 E9PBE3 544 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 GPC4O75487 556 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 MTRF1O75570 445 aaKnown RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 NPPAP01160 153 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 PLA2G4BP0C869 781 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 TRIM49P0CI25 452 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 TRIM49CP0CI26 452 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 CRKP46108 304 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 SERPINB10P48595 397 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 RRP1BQ14684 758 aaKnown RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 RALGPS1Q5JS13 557 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 SCARA3Q6AZY7 606 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 SLC30A10Q6XR72 485 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 ZC3H3Q8IXZ2 948 aaKnown RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 BBS5Q8N3I7 341 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 ENDOVQ8N8Q3 282 aaKnown RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 RSAD2Q8WXG1 361 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 IRGQQ8WZA9 623 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 CNPY3Q9BT09 278 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 FRMD8Q9BZ67 464 aaPredicted RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 GCOM2Q9BZD3 368 aaPredicted RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 GANQ9H2C0 597 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 HPS4Q9NQG7 708 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 IARS2Q9NSE4 1012 aaKnown RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 KLHL11Q9NVR0 708 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 DPP3Q9NY33 737 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 ZMAT5Q9UDW3 170 aaKnown RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 SLC7A8Q9UHI5 535 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 KIAA1257Q9ULG3 409 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 ERVK-11Q9UQG0 969 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 C12orf71A8MTZ7 269 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 PRR5-ARHGAP8B1AHC4 643 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 H0YGN5 161 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 ITM2AO43736 263 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 FUCA1P04066 466 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 EIF2S1P05198 315 aaKnown RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 RBP3P10745 1247 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 CCNB1P14635 433 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 CCNA2P20248 432 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 SLC5A2P31639 672 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 SOX5P35711 763 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 MARSP56192 900 aaKnown RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 ARHGAP8P85298 464 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 VAC14Q08AM6 782 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 KCNH2Q12809 1159 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 JADE1Q6IE81 842 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 NIPAL1Q6NVV3 410 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 FOXR2Q6PJQ5 311 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 CENPUQ71F23 418 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 LSM14AQ8ND56 463 aaKnown RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 ETNPPLQ8TBG4 499 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 SLC7A6OSQ96CW6 309 aaPredicted RBP8.63□□□□□ -1.03
NDE1-202ENST00000396355 TTC25Q96NG3 672 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 C1orf50Q9BV19 199 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 MAT2BQ9NZL9 334 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 ALG6Q9Y672 507 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 NFS1Q9Y697 457 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 SYNGAP1Q96PV0 1343 aa8.63□□□□□ -1.03
NDE1-202ENST00000396355 A0A087WXM4 84 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms