RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 COL4A4P53420 1690 aaPredicted RBP12.5□□□□□ -0.41
ITGB1-202ENST00000396033 TNFRSF10BO14763 440 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 PRPF4O43172 522 aaKnown RBP eCLIP12.5□□□□□ -0.41
ITGB1-202ENST00000396033 KIAA0754O94854 1291 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 COL6A1P12109 1028 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 EPHB2P29323 1055 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 GBP2P32456 591 aaPredicted RBP12.5□□□□□ -0.41
ITGB1-202ENST00000396033 MAGEA3P43357 314 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 SARNPP82979 210 aaKnown RBP12.5□□□□□ -0.41
ITGB1-202ENST00000396033 VARS2Q5ST30 1063 aaKnown RBP12.5□□□□□ -0.41
ITGB1-202ENST00000396033 BEND5Q7L4P6 421 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 NPWQ8N729 165 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 CKAP2Q8WWK9 683 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 SGSM3Q96HU1 749 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 PAIP2Q9BPZ3 127 aaKnown RBP12.5□□□□□ -0.41
ITGB1-202ENST00000396033 MCM8Q9UJA3 840 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 TTLL3Q9Y4R7 772 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 RAD54BQ9Y620 910 aa12.5□□□□□ -0.41
ITGB1-202ENST00000396033 TCP11X1B4DZS4 312 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 ENPP3O14638 875 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 LRIG2O94898 1065 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 INHBAP08476 426 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 GRIA1P42261 906 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 GATMP50440 423 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 CDK7P50613 346 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 ZNF135P52742 658 aaPredicted RBP12.49□□□□□ -0.41
ITGB1-202ENST00000396033 WASHC5Q12768 1159 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 STKLD1Q8NE28 680 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 UNC93B1Q9H1C4 597 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 KCNK1O00180 336 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 DNM1LO00429 736 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 SYN3O14994 580 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 IRAK2O43187 625 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 PSMB4P28070 264 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 SERPINB6P35237 376 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 NFE2Q16621 373 aaPredicted RBP12.49□□□□□ -0.41
ITGB1-202ENST00000396033 PLEKHG4Q58EX7 1191 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 SDHAF4Q5VUM1 108 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 ZNF567Q8N184 647 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 ELAC1Q9H777 363 aaKnown RBP12.49□□□□□ -0.41
ITGB1-202ENST00000396033 SAMD15Q9P1V8 674 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 KLHL8Q9P2G9 620 aaPredicted RBP12.49□□□□□ -0.41
ITGB1-202ENST00000396033 ADAM28Q9UKQ2 775 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 IGLV3-25P01717 112 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 KRT4P19013 534 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 CA4P22748 312 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 MNAT1P51948 309 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 IFT88Q13099 833 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 CTXN3Q4LDR2 81 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 FAM171A1Q5VUB5 890 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 CTAGE3PQ8IX95 158 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 MPP5Q8N3R9 675 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
ITGB1-202ENST00000396033 SLC44A1Q8WWI5 657 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 SEPT8Q92599 483 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 CABS1Q96KC9 395 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 PGLYRP2Q96PD5 576 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 TGS1Q96RS0 853 aaKnown RBP12.49□□□□□ -0.41
ITGB1-202ENST00000396033 GGA2Q9UJY4 613 aa12.49□□□□□ -0.41
ITGB1-202ENST00000396033 NCAM2O15394 837 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 MSI1O43347 362 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 ZNF189O75820 626 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 PGFP49763 221 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 IL9RQ01113 521 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 SF3A3Q12874 501 aaKnown RBP eCLIP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 GPNMBQ14956 572 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 RWDD4Q6NW29 188 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 PRPF39Q86UA1 669 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 SIK2Q9H0K1 926 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 SMOC2Q9H3U7 446 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 SFMBT1Q9UHJ3 866 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 MYO16Q9Y6X6 1858 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 ATXN2Q99700 1313 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 IQANK1A0A1B0GTG1 560 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 A0A1W2PQH9 124 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 PQBP1O60828 265 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 SRGAP2BP0DMP2 458 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 MX2P20592 715 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 GPR15P49685 360 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 CDK16Q00536 496 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 DDR2Q16832 855 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 PARP6Q2NL67 630 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 UNC5AQ6ZN44 842 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 PID1Q7Z2X4 250 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 SCD5Q86SK9 330 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 PPM1NQ8N819 430 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 DEPDC1BQ8WUY9 529 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 FUBP3Q96I24 572 aaKnown RBP eCLIP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 SIGLEC10Q96LC7 697 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 MAGEB18Q96M61 343 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 CASD1Q96PB1 797 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 EBNA1BP2Q99848 306 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 SEZ6LQ9BYH1 1024 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 EIF2B3Q9NR50 452 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 CAPN7Q9Y6W3 813 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 APOEP02649 317 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 RPA3P35244 121 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 WDR4P57081 412 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 HTRA3P83110 453 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms