RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 IRF1P10914 325 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 NR2C2P49116 596 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 GBE1Q04446 702 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 OASLQ15646 514 aaKnown RBP21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 KCTD19Q17RG1 926 aaPredicted RBP21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 LRRC31Q6UY01 552 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 GSTA5Q7RTV2 222 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 ZC3H18Q86VM9 953 aaKnown RBP21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 LEMD2Q8NC56 503 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 RUBCNQ92622 972 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 PRO3102Q9H379 93 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 EPB41L5Q9HCM4 733 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 SMPD4Q9NXE4 827 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 DOCK4Q8N1I0 1966 aa21.07■□□□□ 0.96
VCPKMT-202ENST00000395860 NOTCH4Q99466 2003 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 CLUHO75153 1309 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 TRAV19A0A0A6YYK7 116 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 ZSCAN5CA6NGD5 496 aaPredicted RBP21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 STC2O76061 302 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 MAP3K6O95382 1288 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 ITGAVP06756 1048 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 POU2F2P09086 479 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 RBP3P10745 1247 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 MCM3P25205 808 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 CCR2P41597 374 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 PAFAH1B3Q15102 231 aaKnown RBP21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 MANEALQ5VSG8 457 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 RAP1GAP2Q684P5 730 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 BZW1Q7L1Q6 419 aaKnown RBP21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 C14orf80Q86SX3 495 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 CATSPERBQ9H7T0 1116 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 VANGL2Q9ULK5 521 aa21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 RANBP2P49792 3224 aaKnown RBP21.06■□□□□ 0.96
VCPKMT-202ENST00000395860 H7C0C1 242 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 FGF10O15520 208 aaPredicted RBP21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 MFSD11O43934 449 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 CKMP06732 381 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 PFKLP17858 780 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 HOXC13P31276 330 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 ATP5OP48047 213 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 SLC11A2P49281 568 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 SLC10A2Q12908 348 aaPredicted RBP21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 AUHQ13825 339 aaKnown RBP21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 WDR93Q6P2C0 686 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 DARS2Q6PI48 645 aaKnown RBP21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 SYDE1Q6ZW31 735 aaPredicted RBP21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 CHSY1Q86X52 802 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 IFT20Q8IY31 132 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 SHKBP1Q8TBC3 707 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 TMEM121Q9BTD3 319 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 IGFLR1Q9H665 355 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 PIDD1Q9HB75 910 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 DTLQ9NZJ0 730 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 RAB21Q9UL25 225 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 SGK1O00141 431 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 ACSL4O60488 711 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 CORO1AP31146 461 aaKnown RBP21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 VSNL1P62760 191 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 ARHGAP15Q53QZ3 475 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 STXBP5Q5T5C0 1151 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 GRASPQ7Z6J2 395 aaPredicted RBP21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 DENND1CQ8IV53 801 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 ZNF707Q96C28 371 aaPredicted RBP21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 ZFRQ96KR1 1074 aaKnown RBP21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 ERP44Q9BS26 406 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 ZNF576Q9H609 170 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 NEU3Q9UQ49 428 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 CPQQ9Y646 472 aa21.05■□□□□ 0.96
VCPKMT-202ENST00000395860 ESYT3A0FGR9 886 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 NRG2O14511 850 aaPredicted RBP21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 DDX6P26196 483 aaKnown RBP eCLIP21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 SERPINB6P35237 376 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 XRCC4Q13426 336 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 GPR158Q5T848 1215 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 NADSYN1Q6IA69 706 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 ALLCQ8N6M5 410 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 RSAD2Q8WXG1 361 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 SMG7Q92540 1137 aaKnown RBP21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 AZIN2Q96A70 460 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 TCEAL4Q96EI5 215 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 PRMT1Q99873 361 aaKnown RBP21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 TRIM31Q9BZY9 425 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 NSUN3Q9H649 340 aaKnown RBP21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 C10orf88Q9H8K7 445 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 SFXN1Q9H9B4 322 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 GDF3Q9NR23 364 aa21.04■□□□□ 0.96
VCPKMT-202ENST00000395860 C2orf16Q68DN1 1984 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 GOLGA6L7A0A1B0GV03 622 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 TACR2P21452 398 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 NTHL1P78549 312 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 SLC7A9P82251 487 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 KCNC3Q14003 757 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 TEAD2Q15562 447 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 FBXL22Q6P050 247 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 ZNF683Q8IZ20 524 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 C12orf76Q8N812 135 aaPredicted RBP21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 VN1R2Q8NFZ6 395 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 SLC46A2Q9BY10 475 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 DPH5Q9H2P9 285 aa21.03■□□□□ 0.96
VCPKMT-202ENST00000395860 MPP6Q9NZW5 540 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms