RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 NUDCD3Q8IVD9 361 aa13.18□□□□□ -0.3
CAST-206ENST00000395812 KLHL23Q8NBE8 558 aa13.18□□□□□ -0.3
CAST-206ENST00000395812 DUSP9Q99956 384 aaKnown RBP13.18□□□□□ -0.3
CAST-206ENST00000395812 BCO2Q9BYV7 579 aa13.18□□□□□ -0.3
CAST-206ENST00000395812 FAM124BQ9H5Z6 455 aaPredicted RBP13.18□□□□□ -0.3
CAST-206ENST00000395812 ERVW-1Q9UQF0 538 aa13.18□□□□□ -0.3
CAST-206ENST00000395812 EIF4E1BA6NMX2 242 aaKnown RBP13.17□□□□□ -0.3
CAST-206ENST00000395812 NOL3O60936 208 aaKnown RBP13.17□□□□□ -0.3
CAST-206ENST00000395812 MATKP42679 507 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 DGKGP49619 791 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 ST3GAL1Q11201 340 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 HOMEZQ8IX15 550 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 PANX3Q96QZ0 392 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 FAM167BQ9BTA0 163 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 MLPHQ9BV36 600 aaPredicted RBP13.17□□□□□ -0.3
CAST-206ENST00000395812 SYTL2Q9HCH5 934 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 EPS15L1Q9UBC2 864 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 SFMBT1Q9UHJ3 866 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 PGAP2Q9UHJ9 254 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 TOPAZ1Q8N9V7 1692 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 SIGLEC16A6NMB1 481 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 O00370 1275 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 CFLARO15519 480 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 PPFIA2O75334 1257 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 SOD2P04179 222 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 SLC11A1P49279 550 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 CDH17Q12864 832 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 ARSHQ5FYA8 562 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
CAST-206ENST00000395812 OTOAQ7RTW8 1153 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 C11orf96Q7Z7L8 435 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 TC2NQ8N9U0 490 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 GLIS3Q8NEA6 775 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 KAT5Q92993 513 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 TASP1Q9H6P5 420 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 MRPL42Q9Y6G3 142 aaKnown RBP13.17□□□□□ -0.3
CAST-206ENST00000395812 DUOX1Q9NRD9 1551 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 GON4LQ3T8J9 2241 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 PRNPP04156 253 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 MARSP56192 900 aaKnown RBP13.17□□□□□ -0.3
CAST-206ENST00000395812 GNGT1P63211 74 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 MORF4L2Q15014 288 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 CHST9Q7L1S5 443 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 GLT6D1Q7Z4J2 308 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 TOX2Q96NM4 488 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 PRKD2Q9BZL6 878 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 PHF24Q9UPV7 400 aa13.17□□□□□ -0.3
CAST-206ENST00000395812 MNAT1P51948 309 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 CAP1Q01518 475 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 PDGFRLQ15198 375 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 COLGALT1Q8NBJ5 622 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 OR14C36Q8NHC7 312 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 MAML1Q92585 1016 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 FCRL2Q96LA5 508 aaPredicted RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 NTPCRQ9BSD7 190 aaKnown RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 L1RE1Q9UN81 338 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 SYNDIG1LA6NDD5 238 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 OPHN1O60890 802 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 C1RP00736 705 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 CA3P07451 260 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 DDX6P26196 483 aaKnown RBP eCLIP13.16□□□□□ -0.3
CAST-206ENST00000395812 POU4F1Q01851 419 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 KAT2BQ92831 832 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 VPS50Q96JG6 964 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 C9orf72Q96LT7 481 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 HBS1LQ9Y450 684 aaKnown RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 SLC38A8A6NNN8 435 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 A8MX80 341 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 TGFB1I1O43294 461 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 CARSP49589 748 aaKnown RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 DDX39BQ13838 428 aaKnown RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 BOP1Q14137 746 aaKnown RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 ANKRD20A8PQ5CZ79 823 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 FAM183BPQ6ZVS7 135 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 SYTL1Q8IYJ3 562 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 TNFRSF25Q93038 417 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 APOBEC2Q9Y235 224 aaKnown RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 A0A0A6YYK5 440 aaPredicted RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 HMGB1P1B2RPK0 211 aaPredicted RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 BMPR1AP36894 532 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 MTM1Q13496 603 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 INAVAQ3KP66 663 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 KLHL35Q6PF15 583 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 EPM2AIP1Q7L775 607 aaPredicted RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 CELF5Q8N6W0 485 aaKnown RBP13.16□□□□□ -0.3
CAST-206ENST00000395812 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 MCOLN3Q8TDD5 553 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 BPIFB1Q8TDL5 484 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 HTR3CQ8WXA8 447 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 IGSF21Q96ID5 467 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 PRDM10Q9NQV6 1147 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 NCDNQ9UBB6 729 aa13.16□□□□□ -0.3
CAST-206ENST00000395812 ALS2Q96Q42 1657 aa13.15□□□□□ -0.3
CAST-206ENST00000395812 AFDNP55196 1824 aaKnown RBP13.15□□□□□ -0.3
CAST-206ENST00000395812 CFIP05156 583 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms