RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 TRIM33Q9UPN9 1127 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 ARL2BPQ9Y2Y0 163 aa18.42■□□□□ 0.54
SREBF1-204ENST00000395756 SCNN1AP37088 669 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 TM4SF4P48230 202 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 CCNHP51946 323 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-204ENST00000395756 ARPP19P56211 112 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 XRCC4Q13426 336 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 BANPQ8N9N5 519 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 B3GALT6Q96L58 329 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 DHRS4Q9BTZ2 278 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 KDM4CQ9H3R0 1056 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 CNGB3Q9NQW8 809 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 APOEP02649 317 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 OR1G1P47890 313 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 ECHDC2Q86YB7 292 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 OLFM3Q96PB7 478 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 TSPAN18Q96SJ8 248 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 EBNA1BP2Q99848 306 aaKnown RBP18.41■□□□□ 0.54
SREBF1-204ENST00000395756 MECRQ9BV79 373 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 SLC40A1Q9NP59 571 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 ABI2Q9NYB9 513 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-204ENST00000395756 WASHC5Q12768 1159 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 PDK4Q16654 411 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 TAC4Q86UU9 113 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 RSPH1Q8WYR4 309 aa18.41■□□□□ 0.54
SREBF1-204ENST00000395756 HHLA1C9JL84 531 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 STK10O94804 968 aaKnown RBP18.4■□□□□ 0.54
SREBF1-204ENST00000395756 RPL9P32969 192 aaKnown RBP18.4■□□□□ 0.54
SREBF1-204ENST00000395756 GMPRP36959 345 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 PDK1Q15118 436 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 PCMTD2Q9NV79 361 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 FBXW11Q9UKB1 542 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 CCDC195A0A1B0GUA6 201 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 EME2A4GXA9 379 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-204ENST00000395756 TPH1P17752 444 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 SP3Q02447 781 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 INTS6LQ5JSJ4 861 aaKnown RBP18.4■□□□□ 0.54
SREBF1-204ENST00000395756 KDELC2Q7Z4H8 507 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 DNAAF3Q8N9W5 541 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 OR52K1Q8NGK4 314 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 STAMBPL1Q96FJ0 436 aa18.4■□□□□ 0.54
SREBF1-204ENST00000395756 COPEO14579 308 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 DDHD2O94830 711 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 LRIG2O94898 1065 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 FBXO21O94952 628 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 OAS1P00973 400 aaKnown RBP18.39■□□□□ 0.54
SREBF1-204ENST00000395756 BGNP21810 368 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 TUSC3Q13454 348 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 ARL13BQ3SXY8 428 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 SLC39A12Q504Y0 691 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 CD300LGQ6UXG3 332 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 BZW1Q7L1Q6 419 aaKnown RBP18.39■□□□□ 0.54
SREBF1-204ENST00000395756 OTOAQ7RTW8 1153 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 RTN4RL1Q86UN2 441 aaPredicted RBP18.39■□□□□ 0.54
SREBF1-204ENST00000395756 TTC3P53804 2025 aa18.39■□□□□ 0.54
SREBF1-204ENST00000395756 ABCG1P45844 678 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 ACLYP53396 1101 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 DDR2Q16832 855 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 AP1ARQ63HQ0 302 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 SPATA2LQ8IUW3 424 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 CD99L2Q8TCZ2 262 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 ACTR5Q9H9F9 607 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 CPSF2Q9P2I0 782 aaKnown RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 ATXN2Q99700 1313 aaKnown RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 TTC36A6NLP5 189 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 DFFAO00273 331 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 ZBTB24O43167 697 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 ATP9BO43861 1147 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 KRT37O76014 449 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 ZWINTO95229 277 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 GPR15P49685 360 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 YWHAHQ04917 246 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 DPYSQ14117 519 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 TTC39BQ5VTQ0 682 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 MRPL10Q7Z7H8 261 aaKnown RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 ARMC2Q8NEN0 867 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 GSDMBQ8TAX9 411 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 SRPK1Q96SB4 655 aaKnown RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 FERMT1Q9BQL6 677 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 ACBD6Q9BR61 282 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 UPF3AQ9H1J1 476 aaKnown RBP18.39■□□□□ 0.53
SREBF1-204ENST00000395756 ECT2Q9H8V3 914 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 DNAJB4Q9UDY4 337 aa18.39■□□□□ 0.53
SREBF1-204ENST00000395756 A0A0G2JND7 137 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 C2orf71A6NGG8 1288 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 DCLK1O15075 740 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 ERVK-10P10266 1014 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 SEMA5AQ13591 1074 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 RNF180Q86T96 592 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 ITFG2Q969R8 447 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 MANSC1Q9H8J5 431 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 ZNF395Q9H8N7 513 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-204ENST00000395756 DMAP1Q9NPF5 467 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-204ENST00000395756 SYBUQ9NX95 663 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 STK38LQ9Y2H1 464 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 GOLGA8TH3BQL2 631 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 SOAT2O75908 522 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 JCHAINP01591 159 aa18.38■□□□□ 0.53
SREBF1-204ENST00000395756 SNRPAP09012 282 aaKnown RBP18.38■□□□□ 0.53
SREBF1-204ENST00000395756 IRX1P78414 480 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms